Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0770 ATGGATGAGAAAGTTAAGAAGTCAAAGACTGAAGAAATCTATTTGGAGCCAAATGACAGGAAGAAGGATAAGCACATGAAGAAAAAGAAAAAACACCAAAATGATAAAGCACTCAATTCAGATAAAATTCTTGAGGGAAATTGTATTGATGATGATGCTGAGAGACAGGCTTGTTCCAATGATAAATTTACGAGGAATAAGGAAGAGGATGGGAACATTAGTAAGAAGTTGAAGAAAAAAAGGATAAAGGACACTGAAGTGTTACATAATGCAATTGTTGATGATAAAATATTGCAGGTAATGGATGACAACCAAAAAAGCAAGAGGAAGAAGAGAAACATTTGCAGTGATTCATTAACTGCAATCCAAGAAATAGGTTCTTCAAAACCAAACAAAAGAGGGAAAGTTGTTGGGGATTACGAATTCAAGGACCATGAGGGTGATCCTCCTTTGGCCAGAATCAGCACTGGAGATGCTAATGCACATTCACTTGTCAATGAAGTTGATGATCAAGGTAAGAAGACGGAGAAGAATAAGAAGGAACTGAGAGAAAAGGGTGATTATTTTGTCGTTCCTAGTGACCGGCAAGACAAAGAGACAGAGAAGGTAATTATTAATAAAGTGAAATGGATTGAAGAAGAAGACTGCAAAACCAATAAAGGTGAAGATCGTCAAGGCAAGAAGATGAAGAAGAAGAAGAAACTGAGAAATAAAAACAAAAGTAAGTTTGAAAGCACTGAAGATGATCAAAATTGTGCTGAAGCCAATGAAGGTGATGACAATAACCAAGGCAGGCAAAGGAAGAAGAAATTGAGCAATAAACGAAAAAGTAAGGATAAAAGTGAGTTTAAAAGCAGCAAAGATGATCAACATTGTGCCAATGACAATGAAGGTGATGATGATAACCTGGGCAAGAAGATGAAGGGTAAACAGAGTGAAGAAAGCAAAAGTAATGAGAGCAATGAAGTTAATGATCAAGGAAAGAAGACGAAGATAAACAAGAAAACTAAGGAAGGCACCACATCCAAACGCAAACGAGTAACATTTTCTGATCAGGTGGAGGTCTGTGGTGATGGCTTAATACGGGGGCAAAGGTATACGAATGAAGAAGATGAAAAAATTAAACAGGCTGTTTTCGACTATATAGAGACTCACCAATTGGGGGATGAAGGTCTTGATATGGTTCTTAATACTAGATATCACCCTCAACTTAAAAATTGTTGGAAGGAAATTGGAGTAGCCTTGCCCCATAGGCCTTACATGAGTGTATATTATCGTGCTCACATTTTGTTTACAAGGGATGAGAAACACACTTGGACAGCTGAAGAGATAGAGTTTTTAAAGAAGACAGTCGAACAACATGGATCTGATTTTAAATCAATAGCCGAGGCAATGGGTAAAAATCGACTTCATGTAAAGGATCAATGGCGTAGAATAAAAATGACCAGAAAGAGAGGAGCATGGTCTCAGGAGGAGTATCAAAAGGTATTTGATTTGGTAAGTGTTGACCTACGTGCAAGGGCTTTAGAAGACACTAGGAATAAAAAGCATGGTATGTTGCGAGATAATATTGGTTGGGAGGCAATTAGTGACAAATTGGGAACTAGATGGAATGGAGGAATTTGCCAAAAGTGGTATTCTCAACTAACATCTCCTATGGTTGATCAAGGTATTTGGAGTGATACTGATGACTACCGCTTGGTAGATGCCTTATTTAGCTTGGATGCTTGCAGCATGGAGGAGGTAGACTGGGACAATTTGCTTGAGCACAGGGATGGTGAGTTATGCAGAAAACGATGGAATCAAATGGTTCGATATATTGGAGAGCATGGGAGAAAGTCATTCACTGAGCAGGTGGAAATTCTTGCCAAAAGATATTGCCCTGATTTATTGGAAGCAAGAGAAGCCTTTGATAGCCAACCTGTCATTTGTGGACGATCTTGCGAAAAGATATTGCCCTGA 1962 0.3848 MDEKVKKSKTEEIYLEPNDRKKDKHMKKKKKHQNDKALNSDKILEGNCIDDDAERQACSNDKFTRNKEEDGNISKKLKKKRIKDTEVLHNAIVDDKILQVMDDNQKSKRKKRNICSDSLTAIQEIGSSKPNKRGKVVGDYEFKDHEGDPPLARISTGDANAHSLVNEVDDQGKKTEKNKKELREKGDYFVVPSDRQDKETEKVIINKVKWIEEEDCKTNKGEDRQGKKMKKKKKLRNKNKSKFESTEDDQNCAEANEGDDNNQGRQRKKKLSNKRKSKDKSEFKSSKDDQHCANDNEGDDDNLGKKMKGKQSEESKSNESNEVNDQGKKTKINKKTKEGTTSKRKRVTFSDQVEVCGDGLIRGQRYTNEEDEKIKQAVFDYIETHQLGDEGLDMVLNTRYHPQLKNCWKEIGVALPHRPYMSVYYRAHILFTRDEKHTWTAEEIEFLKKTVEQHGSDFKSIAEAMGKNRLHVKDQWRRIKMTRKRGAWSQEEYQKVFDLVSVDLRARALEDTRNKKHGMLRDNIGWEAISDKLGTRWNGGICQKWYSQLTSPMVDQGIWSDTDDYRLVDALFSLDACSMEEVDWDNLLEHRDGELCRKRWNQMVRYIGEHGRKSFTEQVEILAKRYCPDLLEAREAFDSQPVICGRSCEKILP* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0770 653 MobiDBLite consensus disorder prediction 167 187 - -
Amo09g0770 653 Gene3D - 480 554 - -
Amo09g0770 653 PANTHER GB|AAC33480.1 16 643 - -
Amo09g0770 653 MobiDBLite consensus disorder prediction 276 345 - -
Amo09g0770 653 SMART sant 484 552 IPR001005 -
Amo09g0770 653 SMART sant 362 433 IPR001005 -
Amo09g0770 653 SMART sant 435 482 IPR001005 -
Amo09g0770 653 SUPERFAMILY Homeodomain-like 436 492 IPR009057 -
Amo09g0770 653 ProSiteProfiles Myb-like domain profile. 480 549 IPR001005 -
Amo09g0770 653 MobiDBLite consensus disorder prediction 214 345 - -
Amo09g0770 653 MobiDBLite consensus disorder prediction 140 187 - -
Amo09g0770 653 CDD SANT 438 480 IPR001005 -
Amo09g0770 653 MobiDBLite consensus disorder prediction 1 22 - -
Amo09g0770 653 Pfam Myb-like DNA-binding domain 439 496 - -
Amo09g0770 653 ProSiteProfiles Myb-like domain profile. 551 604 IPR001005 -
Amo09g0770 653 Coils Coil 165 185 - -
Amo09g0770 653 MobiDBLite consensus disorder prediction 1 39 - -
Amo09g0770 653 Gene3D - 440 479 - -
Amo09g0770 653 PANTHER GB|AAC33480.1 16 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0770 Amo-Chr9 12926559 12931476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0770 408 603 MYB-Related Transcription Factor Family AT3G18100 24.138 1.83e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo09g0770 Myb_DNA-bind_6 3.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0770 - - adu:107465053 1253.04