Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0766 ATGGCATCTTCATTCTCAACTCAATTGCTGCAAAGTCAAATTCTACTTCCCCGTTTTCATCATCTCCAGGGGAAACTTAGCCAAGATGTGTCGATGGTTCGGAAGCCGCAGGTTGTCTGTAGCAGTATCGGATCACGGATTGGTTACAACCAAACACTGGCTTCAAGATCACACTATGCTGTGAGGTTTTCTGTCACACAACAATCTGAAGCAAAATCAATGAGATATAGGAGAATGACATGCATGAACGTCACTGAAAGTGAGCTGCTAGCCAAAGTGACAACTAAGTGCTTCTTCGATGTACAAATTGCGGGTGAACCTGCTGGCAGGATTGTTTTTGGAGAGAAAGGATATGGCTATAAAGGATCCTACTTCCATCGTATAATCAAAGACTTCATGATTCAAGGCGGGGACTTCACCGAGGGAAATGGAACCGGTGGAGTTAGTATCTATGGTTCTCGTTTTGAAGATGAGAATTTTAACTTGAAGCATGCTGGTCCTGGAATTTTGAGTATGGCAAATGCTGGTCCTGATACCAATGGCAGTCAGTTTTTTATTTGCACCGTACCGACACCATGGCTAGACAATCGCCATGTCGTGTTCGGACAAGTCATTGATGGAATGGATGTTGTGAAGACTCTCGAGTCACTGGAGACGAGCCAGCGTGATAACAGCCCCAAGAAAGCAAGCAAAATCGCTAATTGCGGTGAACTGCCTCTTGATGGTTGA 729 0.4472 MASSFSTQLLQSQILLPRFHHLQGKLSQDVSMVRKPQVVCSSIGSRIGYNQTLASRSHYAVRFSVTQQSEAKSMRYRRMTCMNVTESELLAKVTTKCFFDVQIAGEPAGRIVFGEKGYGYKGSYFHRIIKDFMIQGGDFTEGNGTGGVSIYGSRFEDENFNLKHAGPGILSMANAGPDTNGSQFFICTVPTPWLDNRHVVFGQVIDGMDVVKTLESLETSQRDNSPKKASKIANCGELPLDG* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0766 242 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 51 114 - -
Amo09g0766 242 SUPERFAMILY Cyclophilin-like 88 238 IPR029000 -
Amo09g0766 242 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 120 137 IPR020892 GO:0003755|GO:0006457
Amo09g0766 242 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 114 241 - -
Amo09g0766 242 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 119 236 IPR002130 GO:0000413|GO:0003755
Amo09g0766 242 Gene3D - 84 241 IPR029000 -
Amo09g0766 242 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 196 211 IPR002130 GO:0000413|GO:0003755
Amo09g0766 242 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 125 137 IPR002130 GO:0000413|GO:0003755
Amo09g0766 242 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 183 195 IPR002130 GO:0000413|GO:0003755
Amo09g0766 242 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 168 183 IPR002130 GO:0000413|GO:0003755
Amo09g0766 242 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 51 114 - -
Amo09g0766 242 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 114 241 - -
Amo09g0766 242 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 91 237 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0766 Amo-Chr9 12835527 12838988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0766 49 223 U-box Gene Family AT5G67530 36.464 2.19e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0766 K03768 - gmx:100526955 348.977