Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0757 ATGGCAATAATGAAGAAGAAGCTGAAATTTTTTGGATTTGCATTTGCATTTGCATGCTTAGTTTGTGGTGTTGTCTCCTATGGATCTGAGCCACTCTCTGTGCTTTCTTTCTTGGAAAACGATGCCGTTTGGGCCAAGCCTTCTTCAGTAACATACCAACCTCTCATGGTTAATCTCACTCTCATTCATGGAGCTGCTTCTATAGGAGCTGTTTGTTTGGATGGAACATTGCCGGGTTACCACTTGGATCGCGGATTCGGATCTGGTGCGAATAGTTGGCTTGTTCACTTGGAGGGAGGAGGGTGGTGTAATACTGTTAGAAACTGCGTCTACAGAAAAACTACTCGCCGTGGTTCCTCGACATACATGGAAAGTCAAATACAATTCACCGGAATCTTGAGCAATAAGGCAGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTCAAATTAAGGTACTGTGATGGGGCATCTTTCAGTGGTGATAGTGAACTTGAGTCTGAGCAGCTTCAATTCCGAGGACAAAAAATATGGCTAGCAGCAATCGAGGAATTGATGTTCCAAGGAATGCAGACAGCGAACCAGGCACTTCTGTCCGGATGCTCGGCTGGCGGCTTGGCATCTCTAATACATTGCGATGAGTTCCGGAGCTTGTTTACAGAATCTACCAAGGTTAAATGTTTGAGCGATGCTGGGTTTTTCCTTGATGCAGTTGATGTCTCTGGGAACCGCACACTGAAGAATCTGTTTGAAGGTGTAGTTCAGTTACAGGATGTACAAAAGAACCTGCCTAAAAGTTGCCTCGACCAATTGGATCCAACTTCGTGCTTCTTTCCTCAGAATATGGTCCAACATATTGAGACTCCATTGTTTCTACTCAATGCAGCGTATGATTCGTGGCAGGTCCAAGCCAGTTTAGCCCCACATTCAGCTGACCCGAATGGCTTTTGGAGCGATTGCAAAGCGAACCATGCGAATTGTACCTCATCTCAGATTCAGTTCCTCCAAGACTTCAGAGATGAATTGCTAAACAACTTGAAAGACTTCGCAAACACACCTCAAACTGGACTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAAGAGACATGGTTTGCTGATAACTCTCCCCTACTTGACAACAAGCCAATTGCAGTTGCTGTCGGAGACTGGTATTTCGACCGAGAAGTAGTCAAAGCCATTGACTGTGCTTATCCCTGTGACAATACTTGCCACAATCTGGTGTTTAAGTGA 1263 0.4442 MAIMKKKLKFFGFAFAFACLVCGVVSYGSEPLSVLSFLENDAVWAKPSSVTYQPLMVNLTLIHGAASIGAVCLDGTLPGYHLDRGFGSGANSWLVHLEGGGWCNTVRNCVYRKTTRRGSSTYMESQIQFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSELESEQLQFRGQKIWLAAIEELMFQGMQTANQALLSGCSAGGLASLIHCDEFRSLFTESTKVKCLSDAGFFLDAVDVSGNRTLKNLFEGVVQLQDVQKNLPKSCLDQLDPTSCFFPQNMVQHIETPLFLLNAAYDSWQVQASLAPHSADPNGFWSDCKANHANCTSSQIQFLQDFRDELLNNLKDFANTPQTGLFINSCFAHCQSERQETWFADNSPLLDNKPIAVAVGDWYFDREVVKAIDCAYPCDNTCHNLVFK* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0757 420 Pfam Pectinacetylesterase 53 400 IPR004963 GO:0016787
Amo09g0757 420 PANTHER NOTUM-RELATED 15 419 IPR004963 GO:0016787
Amo09g0757 420 PANTHER PECTIN ACETYLESTERASE 15 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0757 Amo-Chr9 12614418 12618291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0757 56 420 Carbohydrate Esterase AT1G57590 69.863 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0757 K19882 - gmx:100786972 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1336 19 27271464 27275274 Amo09g0757 09 12614418 12618291 hybridization
Amo16g0980 16 15832338 15836849 Amo09g0757 09 12614418 12618291 PCT
Amo06g0055 06 578807 583321 Amo09g0757 09 12614418 12618291 PCT
Amo09g0757 09 12614418 12618291 Amo16g0980 16 15832338 15836849 PCT
Amo09g0757 09 12614418 12618291 Amo06g0055 06 578807 583321 PCT