Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0742 ATGTACAGATTCGAAGATATCGACAGTGGCAGCTCTCTCAAACTAGCTCTGTGGCCTCGTGTATTATTCCTGCTTCATTGTTGCATGGGCAGAGAGAAATACTTGAACAGGTTTGGCGGGTGGCTTGGAAAGAACTCAATGACAGGCAAAAACCTTAGGCTTATGGAAGATCTGCATGTCCACATGCTTGCTTCACGTGAATCTAGTTCAGGAAGGGATACTATCCGATTGGAATACCTTACCCTTCTCCTTAAACAATTAACAGAACCGCTACGATCTCTGCCCAAGGCTGAAGCTGTTGAGAAAGTTGTGGAATTTATATAG 324 0.4414 MYRFEDIDSGSSLKLALWPRVLFLLHCCMGREKYLNRFGGWLGKNSMTGKNLRLMEDLHVHMLASRESSSGRDTIRLEYLTLLLKQLTEPLRSLPKAEAVEKVVEFI* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0742 107 Pfam Replication factor RFC1 C terminal domain 36 106 IPR013725 GO:0003689|GO:0005524|GO:0005663|GO:0006260
Amo09g0742 107 PANTHER CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 33 106 - -
Amo09g0742 107 PANTHER REPLICATION FACTOR C SUBUNIT 1 33 106 - -
Amo09g0742 107 SUPERFAMILY post-AAA+ oligomerization domain-like 30 63 IPR008921 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0742 Amo-Chr9 12276394 12277549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0742 32 107 Core DNA Replication Machinery Family AT5G22010 69.737 3.14e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0742 K10754 - ahf:112710624 135.576