Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0730 ATGAAAGAAAAGCCACGAGATTTTGGGATGTCTTCTACAAGTGCCACAAGGACAAGAAACAAGACTAGGATCATCAAGTGTGGAGCTTTGCCAGTTCTGCTGAATCACCTTCACTCTCAAAGCCAGACAGTGGTGCAATTGACAGTAGCAGCCATGCTAACCCTCTCATCCTGCAAGGCAAATAAGGTTGCAATTGCTTCATCCGGTGCTCTACAACACTTGGCTGAATTTGTAATAGCGGTGACATCAGTTACAGCTTGA 261 0.4521 MKEKPRDFGMSSTSATRTRNKTRIIKCGALPVLLNHLHSQSQTVVQLTVAAMLTLSSCKANKVAIASSGALQHLAEFVIAVTSVTA* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0730 86 PANTHER U BOX DOMAIN-CONTAINING 16 79 - -
Amo09g0730 86 Gene3D - 5 80 IPR011989 -
Amo09g0730 86 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 28 70 IPR000225 GO:0005515
Amo09g0730 86 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 16 79 - -
Amo09g0730 86 Pfam Armadillo/beta-catenin-like repeat 19 52 IPR000225 GO:0005515
Amo09g0730 86 SUPERFAMILY ARM repeat 19 76 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0730 20 71 U-box Gene Family AT3G46510 38.462 4.78e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0730 - - gmx:100811007 87.8113