Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0706 ATGTCTTCTTGTAGCAGAACGATCCCTGGACTGGATGCTTCTGGGGAAGAGAATTTTGATGGATTCGGCGATACCGGAGATATCGATGCAACGGAATCACTACTGGACATTGGGATGGAAACAGAGGAAGAAGAGTTGGGGGAAGAATCACCCAATGAAGAGGACGGTGAACAGAACGGCAGTGCTGAACATGTAGTGTTTGGTCGTGCACAGATATTAGAGATGGAGTTCGCAAACCCGGATGAGGCGTGTCGTTTTTATGAGCAATATAGTCGAGCAAAGGGTTTTGCGATGCGTCAAGGAAAGAAACTAAAGAATAGGAAGGGTGAAATCGTGCGATACACGTATTTGTGCAACAGAGAAGGATTCAGAGATAGAAAATGGCTTGAGATGCAGGATCGAAAGAGGGAGCACAAGGTTGTTACTCGATGTGGATGTCAGGCAGAGATGAAGATAAAGCAAAAAGCCGAGAGCAACAATTGGTATGTGTCTCGTTTTGTTGATGAGCATAACCACGACCTTCTCCCGGCAAAGTTTGTGTCATACCTGCCAGCATATAGGAAAATATCCGATGTTGATAGAGCCCACATGGAGAGTTTGAGGCAGGTTGGAATTTCAATTCCCAAAATTTACGAGTCTATTGCCGCCCAGGCTGGGGTTTTAACCTACGGTTGCTTTTATGCTGGCTTGAGGACGACATCACGATGTGAGTCACTGCATGCAAAGATGGGGAGGTTTGTGGAGAGGCGATATGGAATATTGGATTTCGTGACGAACTTCCAACGGTGTGTTGAATTCTTGAGAGATAATGAGGAAGAGCTTGACTTTAGGTCGTTGTACGGGAGCCCGGTTCTTCAAACTCAGTTTCCGGAGCTAGAGAAGTCTGGTGCAGTGAACTACACGAGGGAAATATTCTTGCGTTTTAGAGAGGCCCTAAAAAGTAGTGTTCGGGTTACTATCGTGGAGTGCAAGAAATTGGAGGATCGGACAGTTTATGTGACACAAAAGTATCGCAGGCCGCAATCCAGTTGTATGAGGATGGAGTCGTTCGGACTACCTTGCATTCACATACTTGCAGTGTTGGTCCAGTTAGACATAGGTTATCTTCCAAAAAGCCTGGTGTTGCAACGCTGGTCGAAGACGGCCAAAGTTGAGATCGAGGGCCCTTCCATCATGAATGAACCGGGTGAAGCGAATGAGGTATATAGGAGCCGCATGGGTGCTTTCCTGCAGCATTGTAAGCGGTTGGCAAGAGTTGCGTGTATGCGAGAGAGTGATTTCAAGAGCTGCTTGGATAGGATAGTTGAGGAAACTTATGTGTTAGAGATGAAGAATGGTGTTGGGACCGCTGCCCAAGGGACTGCCGCCGGTGGCCAAGATGGAGTGCGTGATCCTATTGCAGTTCGGACTAAGGGAACAGGGTGTGCGCAAGAGCCTTTTGTTTGTAGGGGCATAAAGAGGCATAAGTGCAGCAACTGTGGAGTAGTGGGCCATCGTCGAACCCGTTGCCCGAGTGGTCCATGTAGCCAGCCGGTGTGTACCCAGGACCTCGCTGAAGGTGCTTTAGGGCGGGATGATTCACAGAGCCATGGCACGGAAATTTACATGGGTGCCATTGTGGTATAG 1626 0.4822 MSSCSRTIPGLDASGEENFDGFGDTGDIDATESLLDIGMETEEEELGEESPNEEDGEQNGSAEHVVFGRAQILEMEFANPDEACRFYEQYSRAKGFAMRQGKKLKNRKGEIVRYTYLCNREGFRDRKWLEMQDRKREHKVVTRCGCQAEMKIKQKAESNNWYVSRFVDEHNHDLLPAKFVSYLPAYRKISDVDRAHMESLRQVGISIPKIYESIAAQAGVLTYGCFYAGLRTTSRCESLHAKMGRFVERRYGILDFVTNFQRCVEFLRDNEEELDFRSLYGSPVLQTQFPELEKSGAVNYTREIFLRFREALKSSVRVTIVECKKLEDRTVYVTQKYRRPQSSCMRMESFGLPCIHILAVLVQLDIGYLPKSLVLQRWSKTAKVEIEGPSIMNEPGEANEVYRSRMGAFLQHCKRLARVACMRESDFKSCLDRIVEETYVLEMKNGVGTAAQGTAAGGQDGVRDPIAVRTKGTGCAQEPFVCRGIKRHKCSNCGVVGHRRTRCPSGPCSQPVCTQDLAEGALGRDDSQSHGTEIYMGAIVV* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0706 541 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 69 192 - -
Amo09g0706 541 MobiDBLite consensus disorder prediction 1 26 - -
Amo09g0706 541 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 224 434 IPR031052 GO:0006355
Amo09g0706 541 Pfam FAR1 DNA-binding domain 85 176 IPR004330 -
Amo09g0706 541 ProSiteProfiles Zinc finger CCHC-type profile. 489 505 IPR001878 GO:0003676|GO:0008270
Amo09g0706 541 ProSiteProfiles Zinc finger SWIM-type profile. 329 365 IPR007527 GO:0008270
Amo09g0706 541 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 224 434 - -
Amo09g0706 541 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 69 192 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0706 Amo-Chr9 11530065 11532635 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo09g0706 FAR1 1.3e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0706 - - adu:110274973 611.683