Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0682 ATGGATATTGATGTGAGAAAATGTGGAAGGACTTTATGTTTTCTTGGATTTGACTTAAACACGTTTTCCCGGGTGAAGGCTGTGGCTAGCCACCACGTGCTCCAGGTGGAAACTCGATACTCTGCTGATCCTATGTCCCATGCAAAGATCTTGCTTGCATCCACTAAAGCTTGCTGTAAAGGAATCAGTCTGGTTGGTGCTTCACGGGTGGTGTTACTAAATGTGGTTTGGAACCCCTTGGTCGAAAGACAAGCTATCATCCGTGCTTATAGGCTGGGCCAAAAGAAGGAGGTATACACTTATCATCTCATAACACATGGGACCACCGAGTACGCAAAATACTGCCATCAGGCCAAGAAGGACCGGTTGTCTGAACTGGTCTTTTTAGCAAGGAACACTGAACAGGATGAGCCCAAGAGTTCTGTCGTGGAATTCGAGGATGAAATTCTTGATAAAATGGTGCGCCATGGGAAACTTAAGGACTTGTTTGGTGACTGTGTGTTGAGAGTTTCCAATACTGAAGAGTGCAGCCATTGTGAACAAGTTGTCACGGAGGAATAG 561 0.4563 MDIDVRKCGRTLCFLGFDLNTFSRVKAVASHHVLQVETRYSADPMSHAKILLASTKACCKGISLVGASRVVLLNVVWNPLVERQAIIRAYRLGQKKEVYTYHLITHGTTEYAKYCHQAKKDRLSELVFLARNTEQDEPKSSVVEFEDEILDKMVRHGKLKDLFGDCVLRVSNTEECSHCEQVVTEE* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0682 186 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 4 43 169 - -
Amo09g0682 186 CDD SF2_C_SNF 49 104 - -
Amo09g0682 186 Gene3D - 23 184 IPR027417 -
Amo09g0682 186 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 43 169 IPR044567 GO:0080188
Amo09g0682 186 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 128 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0682 Amo-Chr9 11150367 11153787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0682 35 137 RAD5 or RAD16-like Gene Family AT5G05130 38.835 3.88e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0682 K10875 - lja:Lj0g3v0068189.1 167.162