Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0628 GGGATTGAAAAAGAGTGCACTGATTCAGAGCTAAGGAATGCATATAAGAAACTAGCACTGAAATGGCACCCTGATCGTTGTTCAGCGACGGGGAATTCAAAGTTCGTGGAAGAAGCTAAGAAGAAATTCCAAGCAATCCAGCAAGCCTATTCTGTTTTATCTGACGCCAACAAAAGGCTAATGTACGACGTGGAGTCTACGACAGGCATGGGGGACTTCTTGAACGAAATGGTAACAATGATGAGTCAAACAAAGTCAAATGAAAATGAGAGAGAGAGCTTTGAGGAGCTGCAACAGCTGTTTGAAGATATGTTTCAAGATGATATTGGATCAGATAGAAGCACCACTTTTACTACTGCCGGTTGCTCCTCTTCGTCGGCGTGCATGGCTTATAATGGAAACTCCAACTCGAATAAGCGAAATTCGGCTGAGAATGAATTTTTGAAGGCAGATAATTCCTTTGACTTTGATACCAGTTACCAGAACTTTCTACTTTCTCATTCGATTATGCATGATCTCTTTGGGTTCGTAGCCTTGTGA 540 0.4204 GIEKECTDSELRNAYKKLALKWHPDRCSATGNSKFVEEAKKKFQAIQQAYSVLSDANKRLMYDVESTTGMGDFLNEMVTMMSQTKSNENERESFEELQQLFEDMFQDDIGSDRSTTFTTAGCSSSSACMAYNGNSNSNKRNSAENEFLKADNSFDFDTSYQNFLLSHSIMHDLFGFVAL* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0628 179 PANTHER PUTATIVE, EXPRESSED-RELATED 1 166 - -
Amo09g0628 179 Pfam DnaJ domain 1 63 IPR001623 -
Amo09g0628 179 Gene3D DnaJ domain 1 117 IPR036869 -
Amo09g0628 179 ProSiteProfiles dnaJ domain profile. 1 66 IPR001623 -
Amo09g0628 179 PRINTS DnaJ domain signature 15 30 IPR001623 -
Amo09g0628 179 PRINTS DnaJ domain signature 38 58 IPR001623 -
Amo09g0628 179 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 166 - -
Amo09g0628 179 SMART dnaj_3 1 58 IPR001623 -
Amo09g0628 179 SUPERFAMILY Chaperone J-domain 1 65 IPR036869 -
Amo09g0628 179 CDD DnaJ 1 55 IPR001623 -
Amo09g0628 179 ProSitePatterns Nt-dnaJ domain signature. 43 62 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0628 Amo-Chr9 9703986 9708317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0628 1 63 C2H2 Transcription Factor Family AT1G74250 45.312 1.84e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0628 - - lang:109338829 249.595