Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0611 ATGGGTTCTGAACATCATTTTCCACTTTATTTGCAGATATTTGGAGCCAAATTGTCTGAAGGTGTTTTCATTGTCTCATTTCTCTCCATGTCATCAACAGTAGTGCTCTCATCTCAGCTAGCTGTTGTTGCTTTCTCTTACGCTCTGCATGGTGATAATCTCGGCCTTGGTCTTGAATTGGGTTTATTTATGGTTGCTATTATGGTTTCTACAAAAGATTTTGCTCAATATACTTTGGATCAAGTGGAACTAATTCGAAACCTATTTGTAGCTATTTTTCTCTGGAGTATCGGAATGCTTATACATGTGCAATTTCTTTGGAACCATGTTGATATCTTGTTGGCCATTATATTCACTTCCACTAAAAAATAG 372 0.3656 MGSEHHFPLYLQIFGAKLSEGVFIVSFLSMSSTVVLSSQLAVVAFSYALHGDNLGLGLELGLFMVAIMVSTKDFAQYTLDQVELIRNLFVAIFLWSIGMLIHVQFLWNHVDILLAIIFTSTKK* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0611 123 Pfam Sodium/hydrogen exchanger family 42 118 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo09g0611 123 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 13 51 IPR045158 GO:0015386|GO:0071805|GO:1902600
Amo09g0611 123 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 39 117 IPR045158 GO:0015386|GO:0071805|GO:1902600
Amo09g0611 123 PANTHER K(+) EFFLUX ANTIPORTER 5 13 51 - -
Amo09g0611 123 PANTHER K(+) EFFLUX ANTIPORTER 5 39 117 - -
Amo09g0611 123 Gene3D - 38 122 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0611 Amo-Chr9 8837431 8838460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0611 29 118 Antiporters AT2G19600 59.783 7.70e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0611 - - han:110872166 107.842