Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0588 ATGGCCGTAGCTCCGGCAATAACCGGCCTCCGGCCAACTCTCCTCTTCTACTATATGTTCACCACCGTAGTCATCCACGTCGCAGTGACATTTTCCATGTCAGAAGCTGAAGCTTTGCTGACCCTCAAAAACTCATTCTCCAATGCCCAAGCGTTGGGTAGTTGGGTGGCTAACTCTGTTCCATGCTCTAAAGACCATCAATGGGATGGTGTTGTCTGCGTCAACGGATTAGTCTCAGGGCTTCGTCTTGGAGGAATGGGGCTATTGGGTGAAATAGACGTTGATACATTGCTCGAACTCAAGAATCTCAGAACCATTAGCCTTGTGAACAACTCTTTCTCAGGTTCAATTCCGCAGCTCAACAGAATAGGATTCTTGAAGGCCATGTATTTGTCAGGAAACAAATTCTCTGGGAATATTCCCACAGATTATTTTCAGAGAATGAGGTCTCTGAAGAAATTGTGGCTTTCTAACAACGAATTCACAGGTCAAATCCCAGCATCATTAGCCGAGATCCCTCAGCTTGTTGAGTTGCATCTGGAGAATAATCAGTTTAGTGGAAACATCCCAAATCTTGCGAATCCTTCATTGGTGGACCTCGATTTGTCATATAACAAATTGGAAGGTGAAGTTCCACAGGCTCTGTCGAAGTTCGATGAGAGTTCTTTCGCAGGAAATGATGGTATTTGTGGCAAAACGATTGGGAAGCCATGTGAGAAGCTTCCAGAAGAGACGGTTATTCCCCTACCTGTGACGAATGGGAGCTGGAACAACAAACTGCAGATTGCTGGCTTTGCCTTAACGAGCTTGTTGCTTGTGGCGCTTATTGTTTTCTTCATTGTCCGGTCGAAGCGGAATAAGGACAATGAGGAGTTTGGCAGGTTTGGAAACAACGGTAGTATTGCTGGAGAGTCCGTGGAGGTTCAGGTGAGTCAGCCGGTGAAAAGAGAAGGGGTACCAGCTGTGACGACGGTAGTTAGCAGAAAAGGATCAAGTAAGAGGGGATCTTGTCATGGAGGAAGCAAGGGGGTAGGGGAGCTTGTGGTTGTGAATGATGAGAAGGGGGTTTTTGGGTTGTCAGATTTGATGAAGGCGGCGGCGGAAGTGCTAGGAAATGGTGGGCTTGGGTCTTGTTATAAGGCTGTGATGTCTAATGGGGTGGCGGTGGTGGTGAAGAGGACAAGGGAGATGAATGCGTTGGAGAAAAAAAGTTTTGATACTGAGATTTGTAGGCTTGGGAGGCTAAAACATTTGAATATCTTGACCCCTTTGGCTTACCATTTCAGAAAGGATGAGAAACTAATTATGTCCGAGTATGTCCCTGGGAGCAGTCTATTGTTTTTGCTTCATGGTGACAGGGGACCATCTCATGCTGAATTGGATTGGCCAGCACGTTTAAAGATTGTAAGGGGAATCGCTGAAGGGATGCGTTATCTTCACACAGAACTAGCTTCTTCTAATGTACCCCATGGCAATCTCAAGTCTAGCAATGTTTTATTAGGACCAGATTACCAGCCAATGCTTGTAGATTATGGATTTAGCCAAATGGTTAATCCTTCTACTGCAACACAAGCTCTTTTTGCTTATAAGGCTCCAGAAGCCGCACGAGGCCAAGTTTCGCATAAAAGTGACGTGTATTGTCTTGGAGTTGTTATACTCGAGATCCTCACCGGAAAATTCCCTTCTCAATATCTTAGTAACAAGAAGGGCGGAACCGACATAGTCGAATGGGTTACGTCAGCAATTTCTGAGGGAAGGGAGTCAGAGTTGCTTGATCCTCAGATTGCAAACAACAAAATTTCAATAGGCCAAATGGTCCAACTTCTTCATGTAGGTGCTGCTTGCACAGAAAGTAACCCCAAACAACGAATCGATATCAAGGAGGCCATAACAAGAATAGAAGAGGTAGCAAGGCAGAGTGGAACAACAGAGGTCGTAACATCTCTCAAAGATGGCTTTGCAGATTCCAATATGTCATGGAATCAAGGACAAGGTGAGGAATATCAGAAGAGACATATGGATGGTTCAGAAAGCTTTGGAAGCCAAGACTATTATGAATTTGGCTCCTTCTCCTCATATAATACAACAGCCTAA 2094 0.4508 MAVAPAITGLRPTLLFYYMFTTVVIHVAVTFSMSEAEALLTLKNSFSNAQALGSWVANSVPCSKDHQWDGVVCVNGLVSGLRLGGMGLLGEIDVDTLLELKNLRTISLVNNSFSGSIPQLNRIGFLKAMYLSGNKFSGNIPTDYFQRMRSLKKLWLSNNEFTGQIPASLAEIPQLVELHLENNQFSGNIPNLANPSLVDLDLSYNKLEGEVPQALSKFDESSFAGNDGICGKTIGKPCEKLPEETVIPLPVTNGSWNNKLQIAGFALTSLLLVALIVFFIVRSKRNKDNEEFGRFGNNGSIAGESVEVQVSQPVKREGVPAVTTVVSRKGSSKRGSCHGGSKGVGELVVVNDEKGVFGLSDLMKAAAEVLGNGGLGSCYKAVMSNGVAVVVKRTREMNALEKKSFDTEICRLGRLKHLNILTPLAYHFRKDEKLIMSEYVPGSSLLFLLHGDRGPSHAELDWPARLKIVRGIAEGMRYLHTELASSNVPHGNLKSSNVLLGPDYQPMLVDYGFSQMVNPSTATQALFAYKAPEAARGQVSHKSDVYCLGVVILEILTGKFPSQYLSNKKGGTDIVEWVTSAISEGRESELLDPQIANNKISIGQMVQLLHVGAACTESNPKQRIDIKEAITRIEEVARQSGTTEVVTSLKDGFADSNMSWNQGQGEEYQKRHMDGSESFGSQDYYEFGSFSSYNTTA* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0588 697 Gene3D Phosphorylase Kinase; domain 1 357 439 - -
Amo09g0588 697 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 16 641 - -
Amo09g0588 697 SUPERFAMILY L domain-like 33 217 - -
Amo09g0588 697 SUPERFAMILY Protein kinase-like (PK-like) 368 632 IPR011009 -
Amo09g0588 697 Gene3D Transferase(Phosphotransferase) domain 1 441 654 - -
Amo09g0588 697 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Amo09g0588 697 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Amo09g0588 697 MobiDBLite consensus disorder prediction 656 681 - -
Amo09g0588 697 Pfam Protein kinase domain 368 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0588 697 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 641 - -
Amo09g0588 697 Gene3D Ribonuclease Inhibitor 124 240 IPR032675 -
Amo09g0588 697 Gene3D Ribonuclease Inhibitor 28 123 IPR032675 -
Amo09g0588 697 ProSiteProfiles Protein kinase domain profile. 364 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0588 Amo-Chr9 8273889 8276751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0588 14 637 Receptor kinase-like Gene Family AT3G42880 47.962 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo09g0588 Pkinase 3.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0588 - - var:108346415 832.017