Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0575 ATGTCATTTCCTGCAGAACGAATGCAAGCAGTGTATCAAAATCCTCTACGGCAGGTGAAATCTGGGTTTGACATAACACACCATGAACATTATAAGATCTATAATCTCTGTATAGAAGAAAGTTATGATCCGGCAAACTTTCATGGACGTGTCGAAGCATACCCTTTCGATGATAATAATGTACCGCCCCTTGAAATGATCAAAGATTTTTGTGAAAGTGTGCATTCATGGCTATCAAGTGATCCAAAAGATATTGCTGTCATTCATTGCCTGGCAGGGAAGGGTAGAACTGGTTTAATGGTGTGTTCATACCTAACTTATTCTGGCATGCCAGCAAATGAGGCTTTTCAATTGAATGCAGAGAGAAGGACAACAAATAATGAAGGAGTATCTTATGTTAGGTATCAATACCAAGCCAACGCCGTTGGACTTATTTGGACCTAA 444 0.3964 MSFPAERMQAVYQNPLRQVKSGFDITHHEHYKIYNLCIEESYDPANFHGRVEAYPFDDNNVPPLEMIKDFCESVHSWLSSDPKDIAVIHCLAGKGRTGLMVCSYLTYSGMPANEAFQLNAERRTTNNEGVSYVRYQYQANAVGLIWT* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0575 147 Pfam Tyrosine phosphatase family 78 114 IPR026893 GO:0004721
Amo09g0575 147 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 1 133 - -
Amo09g0575 147 ProSitePatterns Tyrosine specific protein phosphatases active site. 88 98 IPR016130 GO:0016311|GO:0016791
Amo09g0575 147 ProSiteProfiles Phosphatase tensin-type domain profile. 1 143 IPR029023 -
Amo09g0575 147 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 2 138 IPR029021 -
Amo09g0575 147 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 68 123 IPR000387 GO:0016311|GO:0016791
Amo09g0575 147 PANTHER BNAC03G16750D PROTEIN 1 133 - -
Amo09g0575 147 Gene3D Protein tyrosine phosphatase superfamily 1 143 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0575 Amo-Chr9 7993778 7996318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0575 1 135 Protein tyrosine phosphatase (PTP) family AT5G39400 70.213 8.08e-69 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0575 K01110 - adu:110275806 285.419