Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0534 ATGCGGTGGAAGCGCCTCGATCCGCGATTCCACGCGCTTGGACGGCGATTCTACTATTCCCTGCCTCATCCGACGCCGGAAGCCTCTACAATCTGCGATTCTAGGGTTCCTCTCCCGTTCTTGTGCTTAGGCTGCTCTGGTGCTGCGGGCGTTGCCTCTTTTGCCGCCGTCGCCCCCTCTCGTCAATTTGCTTTTGGGCCGCCGTGGCGCCTCCTCTCGTGCATTTGTCCTTCCATCTACAATGCTGCAGACCAGATCTATTACATCTATTCTCTAGATAATTGTAGCAGGGAGACCTTCCTAGAAAAGGATGCTGATTTAAGTCAAGATATGAAGGTGTTGCGTCTCGGATCTGCACTTAGAAAACCCTTGCATCCAAGATTGGTAATGAAGAAGTTGAGTGGCTTATTTGGTGCAAGAAGCAGAAAGCTTCGTAGGGTTTTCAATGGCCTTTGTGCGGTGGTTGTGTTTTTCTTTTTTTACAACCGAGAAGATATTCTTCATAACCCGCTTCTTAGGCAATCTGCAAATTTGGCAAAACACCACCTGCCTCCGAATTCAATATCGAGATATAGGTATTCTCACACTGGGGTTACTCACCGTAGAATGGTTGAAATTAGCCTCAATAGTTCAAGTATAATTAGTGAGCCTTCAGACACAGATTTGCCTGCAGCTATGCCAGGAATGTGTAATGGGTTGCGAAACCATGCTGGTTATGCTACCCATTGTGATTACCTAAAGGCCAATCCGCAGTGTTCTTCGGATGGATATCTTGATTACCTGAGGTTTTTCTATTGCACATGTGGCAGTGTCAGAGTTCTTGGTTATCTAGTATTGGGCGTGTGGCTTGCTGCTTTGTTTTATCTTTTAGGTAACACTGCGGCTGACTACTTTTGCCCTTCTCTTGAGCATCTCTCAAGGCTCTTGAAATTGCCCCCGACTGTGGCTGGGGTCGTGCTGCTTCCTCTTGGTAATGGTGCACCTGATGTGTTTTCCAGTATAGCATCCTTTGTGGGTACTGAAACAGGTCAAGTAGGTCTTAACAGCGTGTTAGGTGGAGCTCTATTTGTTACCTGTGTTGTTGTTGGAGCTGTTTCTCTGTGTGTTTCAGATAAGGAGAGTCAAGTTGATCGCAGATGCTTTATAAGGGATGTTAGTTTCTTTCTAATCACTCTTATCTCGCTGCTAGTGATTTTGGTTGTAGGTAAGGTGAGCGTTGGAGCAGCCATTGCTTTTGTGTCGATTTATGTTGTTTATGCATTCATTGTTGCTGCCAATGAGATATTACGTAAACATGCACATAGTTTGAAATTGGATGTTGTCATGCCGTTGCTTCCTGTCCAGGGAAGCATCTTCTCTATGGGATCTGAAGAGGATACTTCTGTCTATAGCCCTTTCCTTGACTTAGACACCGAGAGTGATCCACCCCGGTTACCTCCTTCCTTGCCTCAATGGATGTGGTCTTCAAACGTGGCAATATATTCAAACCAGGCAAATAAAATTCATATGTTAGATGATGAAAGGCCTCCTTGGGGATGGAGTGATCAGCCCACTGAAAACAACAGGTCTTTCTCTGTTATGAAACTTCTTTTGCTGCTGGAGGTGCCATTGGCAATTCCTAGACAGCTTACAATTCCGATGGTCAATGATGAAGTCTGGTCTAAGCCATATGCTGTGGCCTGTGCTACATTGGCTCCCATTCTCCTAGCCTTCTTGTGGAGCACACAAGATAGTGTGAGTTCTTTGAGTGCAATACTATCTTATTGTATTAGTATTGCAATTGGATGCACCCTTGGTATTCTGGCATATAAATATACAAGGCCTGATCATCCACCACGTAGGTATCTAATTCCTTGGGTTCTTGGAGGATTCTTCATGAGCATAGTGTGGTTCTACATAATTGCAAATGAGCTTGTGGCTCTATTGGTTGCATTTGGTATAATTTTTGGAATTAATCCATCCATCCTTGGATTAACCGTATTAGCATGGGGAAATTCTATGGGTGATTTGATGTCAAATGTTGCATTAGCATTGGATGGAGAAGACGGAGTTCAGATAGCCGTATCTGGGTGCTATGCAGGTCCTATGTTCAACACACTTGTTGGTTTGGGGATCTCATTGCTTCTCGGGGCATGGTCAAAGAAACCTGCATTGTTTGTGGTGCCGGAAGACAGTACCTTATTTTACACACTGGGATTTCTTATCGCTGGACTGCTATGGGCGCTTGTTGTTTTACCTCGCAACAATATGCATCCTAATCGAGTACTAGGAATTGGTCTCATCGGCCTTTATTTGGTGTTTCTTTCGTTCAGGTTGTGCACTTCCATGGGCCTCATAACAGTTGATGGTTCAAGTTGA 2358 0.4483 MRWKRLDPRFHALGRRFYYSLPHPTPEASTICDSRVPLPFLCLGCSGAAGVASFAAVAPSRQFAFGPPWRLLSCICPSIYNAADQIYYIYSLDNCSRETFLEKDADLSQDMKVLRLGSALRKPLHPRLVMKKLSGLFGARSRKLRRVFNGLCAVVVFFFFYNREDILHNPLLRQSANLAKHHLPPNSISRYRYSHTGVTHRRMVEISLNSSSIISEPSDTDLPAAMPGMCNGLRNHAGYATHCDYLKANPQCSSDGYLDYLRFFYCTCGSVRVLGYLVLGVWLAALFYLLGNTAADYFCPSLEHLSRLLKLPPTVAGVVLLPLGNGAPDVFSSIASFVGTETGQVGLNSVLGGALFVTCVVVGAVSLCVSDKESQVDRRCFIRDVSFFLITLISLLVILVVGKVSVGAAIAFVSIYVVYAFIVAANEILRKHAHSLKLDVVMPLLPVQGSIFSMGSEEDTSVYSPFLDLDTESDPPRLPPSLPQWMWSSNVAIYSNQANKIHMLDDERPPWGWSDQPTENNRSFSVMKLLLLLEVPLAIPRQLTIPMVNDEVWSKPYAVACATLAPILLAFLWSTQDSVSSLSAILSYCISIAIGCTLGILAYKYTRPDHPPRRYLIPWVLGGFFMSIVWFYIIANELVALLVAFGIIFGINPSILGLTVLAWGNSMGDLMSNVALALDGEDGVQIAVSGCYAGPMFNTLVGLGISLLLGAWSKKPALFVVPEDSTLFYTLGFLIAGLLWALVVLPRNNMHPNRVLGIGLIGLYLVFLSFRLCTSMGLITVDGSS* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0534 785 Gene3D - 311 444 IPR044880 -
Amo09g0534 785 Gene3D - 559 772 IPR044880 -
Amo09g0534 785 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 139 780 - -
Amo09g0534 785 PANTHER CATION/CALCIUM EXCHANGER 4 139 780 - -
Amo09g0534 785 Pfam Sodium/calcium exchanger protein 281 423 IPR004837 GO:0016021|GO:0055085
Amo09g0534 785 Pfam Sodium/calcium exchanger protein 620 771 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0534 Amo-Chr9 7052095 7056701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0534 231 782 Antiporters AT5G17860 41.049 1.36e-132 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0534 K13754 - gmx:100796101 988.023