Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0516 ATGATGGCACATGCATCTTTTTCCCGAGTATCTCAGATGGCATATGTTATATTTGTTTGTCTCTTACTTATTCTGAAACCGAAGGGTGTGACTTCTTCTTCCGAAAATACCCTTAAGATAAAGTATGATGTCTTTGTTAGCTTCAGAGGCCCGGACATCCGCCGAGGTTTTCTTAGTCATTTGGTTGGCGCACTTTCTAGAAAGAAAATTAATGGCTTTGTAGATGATAAAATTGAGGTAGGAGATGAAATACCAAAATCACTCATTAGAGCAATCGAGGCATCATTAATTTCACTAGTTATATTTTCACCAAACTATTCTTCTTCACGCTGGTGTTTGGAGGAACTTGCAAAAATAGTTGAGTGCAGAGAAAAAAAAGGCCAGTTTGTGCTACCAGTTTTTCTTGACGTAGATCCTTCAGATGTGCGTCATCAAAGAGGATCCTATGGAGACGCATTTGTTAAACATGAGAAGAAATATGACTTGGTCAAGGTTCAACGTTGGAGAACTGCTTTGCAAAGAGCTGCTAATTTATCTGGATTACATTCAACAAAATATATGAATGACTATGGGCTCCTTGAAGCAATCATCAAACATCTGATAGAGAGATTGAATCATGAGCAGAAATATATCTCAAGAGGGCTTATTGGAATTGGCAAATCAATTGCACTCTTAGAGTCAGAATTGAATCCGGAGTTAGGAGACGTGCGTGCTTTGGGAATTTGGGGAATGGGGGGCTTGGGTAAGACAACTCTTGCATGGGAAGTGTTTAACAGCGTACGCTCACAGTACGAAGGTTCTTGTTTTCTGAGAAATTTAAGGGAAAGTTCAGCCAGGGAAGGAATATTTTCTTTGAAGAGCAAACTTTATTCTGAACTCATAGGTGAACCAGGCTTAAAAATTGATAGCTCAAATGGATTGCCCCCTTTTCTTGAGAAAAGACTTGGTCGAATGAAGGTTATAATTGTTCTAGATGATGTCGATAATTTTCGGCAACTGAAAATACTATTTGGAGCAAGGGAACAATTTGGATCAGGTAGTAGAATCATTGTAACATCCAGAGATAAGCAAGTGCTCCATACAGAAGTTGATTTTATCTACCAAGTTAAGCCATTAAAAGTTGATGAGGCGCTTCAACTTTTCAATTCGATTGCCTTCAAACATGAACATCCTGATCTTGAGATGGAATTTCATGAGCAATCAAAAAAGGTGATCGAGTATGCCAAAGGTGTTCCATTAGTTCTTGAAGTTCTGGGACACCATGTCCATGGAAAAGGGAAAGAAATATGGGAAAGCCTGTTAGATAAGCTTAAAAATATGCCAGACAAAGAGGTCCATAACGTGATGAAACTCAGTTATGATGATCTTGATCGCGATGAGAAAAAGATATTCTTGGATATTGCTTGTTCTTTTAAATGGTTACATGTGACAGAGGATTATATAAAACAACTTTTGAAGGATGAGATCAATTCTGTGGCTTTTGGGTTAGAAAGGTTGAAAGACAAAGGCCTTATAACTTTTTCTAAAGGAACTGTTGTATCGATGCATGACATTATTCAAGGAACAGCATACGAGATTGTTCGTCAAGAATCTATTGAAGACCCTGGAAAACGAAGCCGATTATGGGATTCTAATGACATTTATCAAGGGAGTGAAGCCATTAGAAGCATCTCCGCCAAGTTGCCATTGCTTAATAAGAAGCTGCAGCTAAGCCCTCGAGTATTTGCAAAGATGAGCAACCTACAGTTTTTGGACATTTTAGCTCCTTACACGTGTCCTTCTTATTTCCCACAAGATCAAATGAGTTTGTATTTTCCTGAAGGGCTTGAGTCTTTGCCTAATGAACTAAGGCTTCTTCTTTGGGTGCACTACCCTATGGAAGCCTTGCCAACTCAGTTTTCTGCTGAAAATCTTCAAATACTCTCCTTGCCCGTTAACCGAGTGAAAGAACTTTGGCATCAAGAGCAGAATCTTCAAAGTTTAAAGGTGGTTGTACTTGAATGTTCCACCCAATTAACAGAGTCACCAGACTTTTCAAATGCAATAAATCTTGAAGTGCTTGGTCTCAGTTCGAGTTTAAAGTTGATTCACGTACATCCATCTGTTTTCTCTTTAGAGAAGCTCACGACTTTGTACCTTGTAAACTGCGTTTCCCTTACAAGCCTTATAAGTGATACTCATTTAAGGTCCCTTCGCTATCTCTTTCTCTCAGGCTGCACAGCACTGAAGGAATTTTCTGTTATTTCAATGAATATGGTATACCTGTATTTAGAGCACACAGGGATCAAACAACTGCCTGCATCTATTGGAATTCAAAGCAAACTTGAAAAGCTAAATCTTGCAAACAGTACTATTGAGTACTTGCCTGAAACCATTAAGCACCTCTTGAGGCTGAGAAGCTTAAATTTAAGGGATTGCAGGGAGCTTCAAACTCTACCGGAGCTTCCCCCTAACATCGAAGACCTAAATGTTGAAGGTTGCATATCACTGAAGACCGTGTTGTTTCCTGTGACTGTAGCTGAACAAATGAAGGAAGAAAGGAAAAAGGTTGCATTCTGGAATTGTGTGGCATTGGATCAACACTCTCTTGAGGCTATTGGCTTGAATGCGCAACTCAACATCATGAAACATTTGTCCAGATTTGAAAGTGACAGTTACCAAGATTATGATGCAGATTATGATGCTGATGGAGCCACAGCCAGCTATGTGTATCCGGGAAGCAGAATTCCGAAGTGGTTGTTGCACAGAACAATTGGCAATCACATAACCATTGATGTCCCATTTGGTCTGCCTTCCAGTCAGTTACGCTTCATTTTTGTTTTCATTGTTCCGAAAGTTGCATCTGAAGGTTTGTTTTTAAACTTTAGCCTCAGTGTTGGTGATGATGAGGATGAAGGGAAGAGTATCAAGTTGCGCTTGTCTAGGCCAGCTCAAGAAATTGCATCGGACCACGTGTATCTGATGTATGACGTGGCATGCTCTAACTACCTAAGTAGTAAAGCCAAATCTCAGCCACAGTTTGAAATTACGGTTAGTGTGGCATCAGAGTACACGCCGTTGCTATTGAAAGGATTGGGGGTCAGCCTTGTCAATGTGGCAGAATATCAGAGTTTCGTTCAACAAATAAAATGGCTTGACACAACTTCAATAACAAGAGAAACGGATTCATATAATTGTGAACTTTCATATCAGAATTGTTCTCTTGAATTTGGGAAATTTATGGTACCCAGTGCTTATTTCAACAACATGTGCACGCGCTTGGAGCAGGCCGAGGAGGGGTGTGATAGTTAA 3291 0.3978 MMAHASFSRVSQMAYVIFVCLLLILKPKGVTSSSENTLKIKYDVFVSFRGPDIRRGFLSHLVGALSRKKINGFVDDKIEVGDEIPKSLIRAIEASLISLVIFSPNYSSSRWCLEELAKIVECREKKGQFVLPVFLDVDPSDVRHQRGSYGDAFVKHEKKYDLVKVQRWRTALQRAANLSGLHSTKYMNDYGLLEAIIKHLIERLNHEQKYISRGLIGIGKSIALLESELNPELGDVRALGIWGMGGLGKTTLAWEVFNSVRSQYEGSCFLRNLRESSAREGIFSLKSKLYSELIGEPGLKIDSSNGLPPFLEKRLGRMKVIIVLDDVDNFRQLKILFGAREQFGSGSRIIVTSRDKQVLHTEVDFIYQVKPLKVDEALQLFNSIAFKHEHPDLEMEFHEQSKKVIEYAKGVPLVLEVLGHHVHGKGKEIWESLLDKLKNMPDKEVHNVMKLSYDDLDRDEKKIFLDIACSFKWLHVTEDYIKQLLKDEINSVAFGLERLKDKGLITFSKGTVVSMHDIIQGTAYEIVRQESIEDPGKRSRLWDSNDIYQGSEAIRSISAKLPLLNKKLQLSPRVFAKMSNLQFLDILAPYTCPSYFPQDQMSLYFPEGLESLPNELRLLLWVHYPMEALPTQFSAENLQILSLPVNRVKELWHQEQNLQSLKVVVLECSTQLTESPDFSNAINLEVLGLSSSLKLIHVHPSVFSLEKLTTLYLVNCVSLTSLISDTHLRSLRYLFLSGCTALKEFSVISMNMVYLYLEHTGIKQLPASIGIQSKLEKLNLANSTIEYLPETIKHLLRLRSLNLRDCRELQTLPELPPNIEDLNVEGCISLKTVLFPVTVAEQMKEERKKVAFWNCVALDQHSLEAIGLNAQLNIMKHLSRFESDSYQDYDADYDADGATASYVYPGSRIPKWLLHRTIGNHITIDVPFGLPSSQLRFIFVFIVPKVASEGLFLNFSLSVGDDEDEGKSIKLRLSRPAQEIASDHVYLMYDVACSNYLSSKAKSQPQFEITVSVASEYTPLLLKGLGVSLVNVAEYQSFVQQIKWLDTTSITRETDSYNCELSYQNCSLEFGKFMVPSAYFNNMCTRLEQAEEGCDS* 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0516 1096 Gene3D - 39 212 IPR035897 -
Amo09g0516 1096 Gene3D Ribonuclease Inhibitor 559 747 IPR032675 -
Amo09g0516 1096 Gene3D - 372 457 IPR042197 -
Amo09g0516 1096 ProSiteProfiles TIR domain profile. 40 204 IPR000157 GO:0007165
Amo09g0516 1096 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 467 IPR027417 -
Amo09g0516 1096 PRINTS Disease resistance protein signature 238 253 - -
Amo09g0516 1096 PRINTS Disease resistance protein signature 314 328 - -
Amo09g0516 1096 PRINTS Disease resistance protein signature 408 422 - -
Amo09g0516 1096 PRINTS Disease resistance protein signature 726 742 - -
Amo09g0516 1096 SUPERFAMILY L domain-like 563 834 - -
Amo09g0516 1096 SUPERFAMILY "Winged helix" DNA-binding domain 444 549 IPR036390 -
Amo09g0516 1096 Gene3D - 217 366 IPR027417 -
Amo09g0516 1096 Gene3D Ribonuclease Inhibitor 748 840 IPR032675 -
Amo09g0516 1096 SMART till_3 41 178 IPR000157 GO:0007165
Amo09g0516 1096 Pfam NB-ARC domain 237 453 IPR002182 GO:0043531
Amo09g0516 1096 Pfam TIR domain 41 209 IPR000157 GO:0007165
Amo09g0516 1096 Coils Coil 1087 1096 - -
Amo09g0516 1096 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 30 1047 - -
Amo09g0516 1096 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 1047 IPR044974 GO:0006952
Amo09g0516 1096 SUPERFAMILY Toll/Interleukin receptor TIR domain 32 180 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0516 Amo-Chr9 6613543 6624529 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0516 42 814 WRKY Transcription Factor Family AT4G12020 32.491 8.51e-98 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0516 - - ahf:112710431 1929.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0577 19 8924638 8935871 Amo09g0516 09 6613543 6624529 hybridization