Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0474 ATGATGAGTGGAAGTTTAAGTGGTAGTGCAAGGAACAGTAGTAGGTCTCCTTTCACCCCAAATCAGTGGCAAGAACTTGAACAACAAGCTCTTGTTTTTAAATACATGGTTACAGGTACCCCAATCCCACCAGATCTCATATTCTCAATTAAAAGAAGCCTAGACTCCTCAATATCTTCAAGACTCTTCCCACACCATCCAAGTGGTGCAGTTGGGTATGCATATTTTCAAATGGGGTTTGGCAGAAAAGTAGACCCGGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGGTGCTCAAAGGAAGCATATCCAGATTCTAAGTACTGTGAAAGGCACATGCATAGAGGCAGGAACCGTTCAAGAAAGCCTGTGGAAATTTCTTCATCATCAACCACAAACACAAACACAAACACAAACAACAACAACAACACTTCCTCTTCTCAAGTCATGAATCATCATCATCAATCTTCTTATACTGTTAACTGCAGCAATGATAGCAATAATAATAATAACATGGCTTCTTCAACAGCTTGTTCTTTCAGTTTCAACCCATCTGAGTCACAGCAGCAGCATCAATACTTCTCCCAATCTTACCAAAACCCCTTCTTTTACACCCAATCAACGTCTTCTTCTTCTTCTTCTAAACACCATGATGCTGATTTTCCTCCTCATGATGCCACCACACACCACTTATTCATGGACTCCGGCTCTTATTCTCATGACCAAAAGGACTATAGGCATATTCATGGAATGAGGGAGGATGTGGATGAAAGAGCTTTCTTTCCAGAAGCTTCTGGTTCAGCTAGGAGCTACCTTCATGACTCATATCAGCACCACCACCAACAACAACAACAGCATCTATCAATGGGTTCCTACAAGAACTACTCATCAAATTCCCATTTCCAAATCATGAACAACAATAGTAATAACGACGATCCAAGAAACCAAGAGCAACATTGCTTTGTGTTGGGGACAGACTTCAAATCAACGAGCAAAGAGAAAGACAACACTGAGAAAACAACATCAACAACACAGCAAAGACCCCTTCACCACTTCTTTGGTGAGTGGCCACCAAAGAACACTGATTCATGGCTTGATCTTGCTTCCAACTCTAGAATACCCTCCTCAGATGAATGA 1146 0.418 MMSGSLSGSARNSSRSPFTPNQWQELEQQALVFKYMVTGTPIPPDLIFSIKRSLDSSISSRLFPHHPSGAVGYAYFQMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEISSSSTTNTNTNTNNNNNTSSSQVMNHHHQSSYTVNCSNDSNNNNNMASSTACSFSFNPSESQQQHQYFSQSYQNPFFYTQSTSSSSSSKHHDADFPPHDATTHHLFMDSGSYSHDQKDYRHIHGMREDVDERAFFPEASGSARSYLHDSYQHHHQQQQQHLSMGSYKNYSSNSHFQIMNNNSNNDDPRNQEQHCFVLGTDFKSTSKEKDNTEKTTSTTQQRPLHHFFGEWPPKNTDSWLDLASNSRIPSSDE* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0474 381 MobiDBLite consensus disorder prediction 126 170 - -
Amo09g0474 381 MobiDBLite consensus disorder prediction 208 238 - -
Amo09g0474 381 MobiDBLite consensus disorder prediction 112 170 - -
Amo09g0474 381 ProSiteProfiles QLQ domain profile. 17 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
Amo09g0474 381 Pfam WRC 86 128 IPR014977 -
Amo09g0474 381 PANTHER GROWTH-REGULATING FACTOR-LIKE PROTEIN 10 378 - -
Amo09g0474 381 MobiDBLite consensus disorder prediction 366 381 - -
Amo09g0474 381 MobiDBLite consensus disorder prediction 294 319 - -
Amo09g0474 381 MobiDBLite consensus disorder prediction 294 381 - -
Amo09g0474 381 MobiDBLite consensus disorder prediction 1 21 - -
Amo09g0474 381 PANTHER - 10 378 IPR031137 GO:0005634|GO:0006351|GO:0032502
Amo09g0474 381 SMART QLQ_2 16 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
Amo09g0474 381 Pfam QLQ 17 50 IPR014978 GO:0005524|GO:0005634|GO:0006355
Amo09g0474 381 ProSiteProfiles WRC domain profile. 85 129 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0474 Amo-Chr9 5954349 5956985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0474 5 358 GRF Transcription Factor Family AT3G13960 42.037 2.38e-72 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Amo09g0474 WRC 2.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0474 - - ahf:112710413 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1003 19 17029482 17031747 Amo09g0474 09 5954349 5956985 hybridization