Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0453 ATGGATCAGTTTGCGATTGGGAAGCCGTGTGAAGAGGAAAAATGGGCGACGGAGATTCGCGATCCAAGAAAAGGTGTTCACGCTTGGCTTGGAACCTTCAACAACACCAAAGAAGCCACCAGGGTCTATGACAGAGAAGCTCGTAAGATTCGCGGAAAGAAAGCTAAAGTGAACTTTCCCAACGAGGATGACGAACACTCCATTCAACAATCTCGCAACATTATTCCAAACCTTCTTCCTCCTCCCATTTGA 252 0.4683 MDQFAIGKPCEEEKWATEIRDPRKGVHAWLGTFNNTKEATRVYDREARKIRGKKAKVNFPNEDDEHSIQQSRNIIPNLLPPPI* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0453 83 PANTHER DNA-BINDING DOMAIN 14 74 IPR044808 GO:0003700|GO:0009873
Amo09g0453 83 SMART rav1_2 14 66 IPR001471 GO:0003700|GO:0006355
Amo09g0453 83 PANTHER EREBP TRANSCRIPTION FACTOR 14 74 - -
Amo09g0453 83 ProSiteProfiles AP2/ERF domain profile. 2 60 IPR001471 GO:0003700|GO:0006355
Amo09g0453 83 Gene3D AP2/ERF domain 8 61 IPR036955 GO:0003700|GO:0006355
Amo09g0453 83 CDD AP2 14 61 IPR001471 GO:0003700|GO:0006355
Amo09g0453 83 SUPERFAMILY DNA-binding domain 12 61 IPR016177 GO:0003677
Amo09g0453 83 MobiDBLite consensus disorder prediction 61 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0453 Amo-Chr9 5367897 5368148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0453 14 62 AP2-EREBP Transcription Factor Family AT1G72360 69.388 1.18e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0453 K09286 - rcu:8259910 103.605