Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0448 ATGATGGCACGGACAACATCGTATGTTTCTAGAACAGATCAGATGCCATCATTCAGCTTTGGCCTCACTGATTCAAGCCAAGAAGAAGCATCAACGCAGGAGGGAGCGTCAATGCAGGAGGCAGAAAGGGCAAAATCTCCAGAAACTGCAAATTTGCTAGAACAATTAGAGAATTTGGTAGAAGTGCCTTTTACCAAATCAAAGGGCGACAAGTGCCATTTTTCACATAATACAGTCCATTTTACCAAATCAAAGTCATGCTCCTTTTTCGCTCGTCACTCCTGCATGAAAGGGGATGACTGCCCTTTTGATCATCAACTCTCTAAGTATCCTTGTGTTAGCTCTGTGTCTGGAGGTGGTGATGCATGCTTGTTTTGCACCGTCACCAGCCAAAGAAAATTTTGCTATGCCTTCAAGGATTCACAAACTAGGAATGAAATCTCCACACTTTTCAGGAAACACAAATTCCAACATGCCTCCTACAAAACCATTTAA 495 0.4263 MMARTTSYVSRTDQMPSFSFGLTDSSQEEASTQEGASMQEAERAKSPETANLLEQLENLVEVPFTKSKGDKCHFSHNTVHFTKSKSCSFFARHSCMKGDDCPFDHQLSKYPCVSSVSGGGDACLFCTVTSQRKFCYAFKDSQTRNEISTLFRKHKFQHASYKTI* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0448 164 Gene3D - 65 111 - -
Amo09g0448 164 ProSiteProfiles Zinc finger C3H1-type profile. 81 108 IPR000571 GO:0046872
Amo09g0448 164 SUPERFAMILY CCCH zinc finger 83 106 IPR036855 GO:0046872
Amo09g0448 164 MobiDBLite consensus disorder prediction 16 39 - -
Amo09g0448 164 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 68 125 IPR045124 GO:0003723|GO:0045892
Amo09g0448 164 PANTHER PROTEIN SUPPRESSOR OF SABLE 68 125 - -
Amo09g0448 164 MobiDBLite consensus disorder prediction 16 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0448 Amo-Chr9 5311404 5314954 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Amo09g0448 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0448 - - aip:107617350 157.147