Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0438 ATGCTTTTTTCTACCTTGACAACCATCTTTCTTTTTTGTGTAACATTGCCATTGATTCACCCTACAATAACCGCCGCTAGCACCACCTTAGGAAATAAGACCGATTTTGTGACATTACTTCAAATTAAAAAATCAATATCAAGTGACCCTTATGGAATTTTGGTGTCATGGAATACTTCTAACCATTTTTGCAGCTGGGGTGGAGTCACATGTGGCATCAAACATCAACGAGTTGTGATGTTGAACCTTAAAGAGTATCATTTGAGTGGGACCATATCTCCTTATATTGGCAACCTTTCTTTCTTGAGAATTCTCAACCTTCTTAGCAACAAATTTTATGGAGAAATTCCAAGAGAGTTGGGCCGTTTGTTTAGACTAAGGAAACTCAACCTTTCAAACAACAATTTGACAGGGGAGTTTCCTATTAGTTTAACTAATTGCTCTAAACTAAGATACTTAAATTTTTCAGCAAATAGTTTTCATGGAAAAATACCAATTGAGGTTGGTTCTCTTAAGAAATTAGAAAAGTTGAGTCTTTTTAAAAACAATTTTGGTGGGAAAATTCCACCCTCCATAGGAAATATCTCTTCCCTTAATGTCTTTTCCATAGCAGTTAATAACTTGGAGGGAAAGTTACCTGGAGAATTTGGACAACTGAAAAAGTTGTCCATGTTAGTGATACTTTCAAACAGGTTTTCTGGTATGCTTCCTTCTTCATTTTGCAATATGACATCTCTTGCTTTCTTCTCAGCTGCAGAGAACCAATTTCACGGCTCGCTTCCGGCCGGCATGTTCTCCGCCCTCTCGAATTTGCAAATGTTTGAAATTGGAATGAACCAAATTTCAGGTCCAATCCCAACTTCAATAGCAAATGCATCTTTGCTTCAAAAATTTGATATTGGTTTCAACAACTTTGTTGGACAAGTTCCATCTGTTGAAAAATTGCAACATCTTACCTGGCTAAACTTAAATTACAACAATCTTGGCAGTGGTTCAGATGGTGATTTGGACTTTATAACATCTTTGGTTAATTGCACCAAATTGGAAAATTTGGTTCTTGGTTCCAACAAGTTGGGGGGTATTTTACCCATCTCAATAGGCAATTTGTCCACCCAACTCATTGAAATAAGTCTCTTTGTTAATCACATACATGGAACTATTCCTGAAACAATAGGGAATAACATAAATTTAATTTCTTTGTATTTGGGTGACAACCACTTTAGTGGGAATGTTCCAAATTCTTTTGGAAAGTTTCATAAGATGCAATCTTTAGATGTGGGGCAAAACCACCTTTTAGGTGAGATACCTCCCTACTTGGGAAATCTCACTCAATTGGTTGAAATAAGCATTGCAAACAATATGTTGGAAGGAAAAATTCCACCCATTATTGCAAACTGGCAAAAATTGCAGATTCTAGACTTTTCTAGAAACAATTTTGCTGGTGAGATACCTCAGCAGATTTTTGGACTTCCTTCCTTGTCAATATTTTTGAACTTATCTCATAACTCATTCAATGGCAATCTATCTGTTGAAGTGGGATCCCTTTCAAGCCTTGACACTTTAGATATCTCCCATAACTATCTCTCTGGGGAGATTCCGGAGACGATCGGCGAGTGCAAAAGCATGGAGTATCTGGATTTACATGGGAATTCCTTCAATGGAGTGATACCTTCATCAATAGCTTCATTGAAAGGACTTACTCATTTGGATCTCTCACTAAACAATCTGTTTGGAACAATTCCAATAGAATTGCAAAGCCTTTCATTTCTAACATACTTGAATCTTTCTTTCAATAACTTGGAGGGCAAGGTACCAATAGAGGGTGTTTTCAAGAATGCGAGCGCAATATCAGTAGCCGGTGATCATAATCATCTTTGTGGTGGTATATCAGAGTTGAATCTAGCAGCATGCCCTGCTACTATTGTGTTAAGAAACAAGCACCATAATTTGAAGCAAGTAGTAATCATCGTTTGTGTGATTGTTTGCTTTCTGTTATTTTCAACTCCTGTCTTGTGTTATTGGATCAAAAAGAGAAAAAGACCATCATTTTTATCATCTTGGAAGTCATCAATATTCCAGCTTCCTATGGTGTCATACAAAATTCTACACCATGCAACAGAGGGGGATTTCGTTGCTATAAAGGTAATGAACATCGAAACGAATGAAGCCAACAAGAGTTTCATTGCTGAATGTAATGCACTGAAGTTTATGAGGCGTAGAAATCTTGCAAAGATTTTAACTTGTTGCTCAAGCATTGATTTCAAAGGCAATGATTTCAAAGCATTGGTGTTTGAGTACATGGCTAACGGAAGCTTAGAAAAGTGGTTGCAACCTTGTGGTGAAAGCATTGAAGATGAATCACATCCATTGGACCTTGCTCAAAGATTGAACATTCTAATTGATGTGGCAAATGCATTACATTATCTTCACTATGAATGCGTGGAACCAATCATTCACTGTGATTTAAAGCCAAGCAATGTGCTCCTTGATGATCACATGGTTGGTCACGTGACTGATTTTGGGTTAGCAAGGCTTCTCACAGATTCTAATCAGCAATCTACCACCATTGGGTTAAAGTTTAAGTATGGAATAGGTTCTCCGGTGTCAATGCAAGGTGACACATATTCTTTTGGAATTTTAGCATTGGAAATGTTAAGTGGAAAGAGACCAACGGAAGAAATGTTCAAAGACGGAGAAAATCTACATCATTATGTGAGCATGGCATATTCAAACAACCTGTTAGAGATTGTGGACTCAACTCTTTTCACAAATCAAATACAACGAAGATCCACTGAGGAAGAAAGCATTATAGAGAATGTGATCATCATTCTTCCAAAAGAAGAGACTTGTGTGTTTTCTCTAACAAGAATTGCACTTGCTTGTTCAATGGAATCTCCCAATGACAGAATGAACATCAAGGATGTTATTAGGGAGCTCAATCTTTCTAGAAGTGCATTTCTTCATGGTTAA 2970 0.3714 MLFSTLTTIFLFCVTLPLIHPTITAASTTLGNKTDFVTLLQIKKSISSDPYGILVSWNTSNHFCSWGGVTCGIKHQRVVMLNLKEYHLSGTISPYIGNLSFLRILNLLSNKFYGEIPRELGRLFRLRKLNLSNNNLTGEFPISLTNCSKLRYLNFSANSFHGKIPIEVGSLKKLEKLSLFKNNFGGKIPPSIGNISSLNVFSIAVNNLEGKLPGEFGQLKKLSMLVILSNRFSGMLPSSFCNMTSLAFFSAAENQFHGSLPAGMFSALSNLQMFEIGMNQISGPIPTSIANASLLQKFDIGFNNFVGQVPSVEKLQHLTWLNLNYNNLGSGSDGDLDFITSLVNCTKLENLVLGSNKLGGILPISIGNLSTQLIEISLFVNHIHGTIPETIGNNINLISLYLGDNHFSGNVPNSFGKFHKMQSLDVGQNHLLGEIPPYLGNLTQLVEISIANNMLEGKIPPIIANWQKLQILDFSRNNFAGEIPQQIFGLPSLSIFLNLSHNSFNGNLSVEVGSLSSLDTLDISHNYLSGEIPETIGECKSMEYLDLHGNSFNGVIPSSIASLKGLTHLDLSLNNLFGTIPIELQSLSFLTYLNLSFNNLEGKVPIEGVFKNASAISVAGDHNHLCGGISELNLAACPATIVLRNKHHNLKQVVIIVCVIVCFLLFSTPVLCYWIKKRKRPSFLSSWKSSIFQLPMVSYKILHHATEGDFVAIKVMNIETNEANKSFIAECNALKFMRRRNLAKILTCCSSIDFKGNDFKALVFEYMANGSLEKWLQPCGESIEDESHPLDLAQRLNILIDVANALHYLHYECVEPIIHCDLKPSNVLLDDHMVGHVTDFGLARLLTDSNQQSTTIGLKFKYGIGSPVSMQGDTYSFGILALEMLSGKRPTEEMFKDGENLHHYVSMAYSNNLLEIVDSTLFTNQIQRRSTEEESIIENVIIILPKEETCVFSLTRIALACSMESPNDRMNIKDVIRELNLSRSAFLHG* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0438 989 Gene3D Ribonuclease Inhibitor 190 264 IPR032675 -
Amo09g0438 989 Gene3D Ribonuclease Inhibitor 265 334 IPR032675 -
Amo09g0438 989 Pfam Leucine Rich Repeat 396 418 IPR001611 GO:0005515
Amo09g0438 989 Pfam Leucine rich repeat 542 600 IPR001611 GO:0005515
Amo09g0438 989 Pfam Leucine rich repeat 125 184 IPR001611 GO:0005515
Amo09g0438 989 ProSiteProfiles Protein kinase domain profile. 688 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0438 989 Pfam Protein kinase domain 703 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0438 989 Gene3D Ribonuclease Inhibitor 33 189 IPR032675 -
Amo09g0438 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
Amo09g0438 989 PANTHER LRR RECEPTOR-LIKE KINASE 709 987 - -
Amo09g0438 989 PANTHER LRR RECEPTOR-LIKE KINASE 21 708 - -
Amo09g0438 989 PANTHER OS04G0122200 PROTEIN 21 708 - -
Amo09g0438 989 SUPERFAMILY L domain-like 36 328 - -
Amo09g0438 989 Gene3D Transferase(Phosphotransferase) domain 1 768 986 - -
Amo09g0438 989 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Amo09g0438 989 Gene3D Phosphorylase Kinase; domain 1 697 767 - -
Amo09g0438 989 SMART LRR_typ_2 123 147 IPR003591 -
Amo09g0438 989 SMART LRR_typ_2 315 338 IPR003591 -
Amo09g0438 989 SMART LRR_typ_2 587 612 IPR003591 -
Amo09g0438 989 SMART LRR_typ_2 466 490 IPR003591 -
Amo09g0438 989 SMART LRR_typ_2 515 539 IPR003591 -
Amo09g0438 989 SMART LRR_typ_2 563 586 IPR003591 -
Amo09g0438 989 SMART LRR_typ_2 418 442 IPR003591 -
Amo09g0438 989 SUPERFAMILY Protein kinase-like (PK-like) 700 979 IPR011009 -
Amo09g0438 989 SMART serkin_6 699 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0438 989 Gene3D Ribonuclease Inhibitor 335 637 IPR032675 -
Amo09g0438 989 PANTHER OS04G0122200 PROTEIN 709 987 - -
Amo09g0438 989 SUPERFAMILY L domain-like 371 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0438 Amo-Chr9 5182163 5186620 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0438 32 986 Receptor kinase-like Gene Family AT3G47570 42.442 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo09g0438 Pkinase 1.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0438 - - ahf:112708871 996.497