Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0437 ATGTTCTTAACTTCAATGCGACTCCTTTTCTTTTATGTATTCTTTGTGTGGCTTAAAGCTTCACTAGCCACCAACATTTTAGGAAATGGGACCGATGTTATAGCATTGCTTCGGTTTAAAGAATCAATATCCAATGACCCATATGGAGTTTTAAGCTCATGGAATACTTCAAGCCACTTCTGCAACTGGCATGGAATCACATGCAGCATTAAGCATCAAAGAGTGCAACACTTGAGCTTTCAACTATGTCGTTTATTCAGATTACAACAACTCTACCTCCCGGATAACAAACTGACAGGAGAGTTTCCTGTCAGTTTGACTAATTGCTCGGAGCTAAGGCTTCTAAACATGTCGAGTAACAATCTCTACGGCCGAATACCAATGGAGATTGGCACTCTTAAGAAGCTTGAAAAGTTGAGTCTTAACAAGAATAACTACTCTGGAGAAATTCCATCTTCCATATGGAATATCTCTTCTCTAAGTATTCTTTCTATGGGTTATAATTACTTGGAAGGCAAGATACCTGAAGAAATTGGAAAATTAAAAGGCTTATCAGGTTTTGCCATTGGTGCTAATAAACTGTCCGGGGAGCTTCCTTCTTCGCTTTACAATCTGTCCTCGCTCGCTCTTTTCTATGCTGCAGAAAACCAGTTTCATGGCTCTCTTCCATCCAACATGTTCTCCAACCTCATCAGTCTGCAAGAGATTGGCATTGGAGGGAATCAAATTTCAGGTCCAATTCCAACTTCTATTTCAAATGCATCTTCACTTCAACTTTTTGATATTGGCTATTGRAGTTTTGTTGGAAAAGTTCCAAATCTAGGAAACCTGAAGGATCTTTATTGGCTAAATTTAAACTACAACAATCTTGGTAGTAATTCAGCTCTAGACTTGGATTTCATAACATCTTTGATTAATTGTACTGAATTGGAAAGTTTGGTTTCGAGTTCCAACAATTTTGGAGGTGTTTTACCCAACTCTATAGGGAATTTGTCAACTCAACTCACTGAAATTAGTCTAGATTTTAATCACATACATGGAACTATCCCTGAAACTATATGCAATAACATAAACTTAATTACCTTGAATTTGGAATATAACCAACTTACCGGGTTTGTTCCAAATTCTTTTGGAAAGTTTCAGAAAATGCAACTATTGAGTTTGGGTGCAAACCACCTTATTGGTGACATACCTTTCTCCTTTGGTAACCTCACTCAACTGCTTGAAATAAGAATTTCAAACAACATGTTGCATGGGAAAATTCCACCAAGTATTGGAAATTGGCAAAACTTGTTGTACTTAGATTTTTCAGGAAACAATTTTAGTGGTGCTATACCAGTGGAAGTTTTTAGCCTTTCATCCTTGTCCACAAATCTGAACTTATCTCATAATTCACTGAATGGCACTCTTCCTGTTGAGGTTGGAGCTCTTGGAAACCTTGGAACTTTGGATCTCTCCAATAACTATCTATCTGGWCAGATTCCTATGACTATTGGAAAGTGCACAKGTATGGAATATTTAYACTTACATGGTAATTCTTTCAGTGGRATGATACCTTCATCAYTAGCTTCATTGAAAGGCCTRTCTCATTTGGATCTCTCGCYAAATAACTTGTCCGGATCAATTCCAACAGATATGCAGAGGCTTTCTCTTCTAACATATTTGAATGTGTCTTTCAATATGCTAGAAGGGAAGGTACCATTGGAGGGTGTATTCAAGAATGCAACTGCAATTTCAATTGTTGGTAATAATAAGCTTTGTGGAGGTGTCTTACAGTTACATCTTGCACCATGCCCTGCCAATGTTATGGCAAGAAGCAATCACCATAATTTGAAGCTAGCCATAATCGTAATTTGTGTGGTTGTATGCCTTATTTTGCTTTCAATTGTTGTTGTTGTTTTCTTGAGCAAGAAGAAAAAAAGAACATCATCTTTGACAGCATCAACAAATCAGTATTCAATGGTGTCATACCAAATCCTACATCATTCAACAGAGGGGTTTTCTACCAGTAACTTGATTGGATCTGGTAGCTTTGGTTGTGTGTATAAAGGATTCCTTGAATCCGAACACAAGTTCGTCGCCATAAAGGTGATAAACCTTCAAATGAGCGGAGCTCACAAGAGTTTCATTGCTGAATGTAATGCTCTAAAATTTATCAGGCATCGAAATCTGGTGAAGATTTTAACATGTTGCTCGAGCATAGATTATAGTGGCCAAGAATTTAAAGCATTAGTGTTTGAGTACATGCCTAATGGAAGCTTAGAAAAGTGGTTGCATCCTAGTGCTGAAATCACAGATAGGCTATATACATTAGACCTTACTCAAAGACTAAATATTGTTGTTGATGTGGCTTCTGCATTACATTATCTTCACTATGGATGTGAACAACCTGTTGTTCATTGTGATCTAAAGCCAGAGAATGTGCTTCTTGATGACATGGTTGCTCATGTGACTGATTTCGGATTAGCAAGGCTTCTCTCAATGACTAATGGTGATCCTCATAATCAATCTACCACAACTGTGTTCAAGGGAACTATTGGATATGCTCCTCCAGAGTATGGAATGAGTTATGAGGTGTCAATGCAAGGTGATGTGTATTCTTTTGGAATTCTAGTATTGGAAATGGTCACTGGAAGGAGGCCAATGGAAGAAATGTTTAAAGATGATAACAATCTTCATAACTATGTGAAGATGGCATACTCAAACAATCTTCTAGAGATTATGGACTCAACTCTTTTGCCAAAACAAATTGGAGAAGAAGAAAACTACACAAAGAAGCTAACCATGTGTGTATTTTCTCTAATTAGAATTGGACTTGCTTGTTCAGTTGAATCACCGAATGAAAGAATGAACATGGCAGATGTCACTAGGGAGCTAAACCTTACCAAAGATATATTTCTTCAAGATTGA 2910 0.3729 MFLTSMRLLFFYVFFVWLKASLATNILGNGTDVIALLRFKESISNDPYGVLSSWNTSSHFCNWHGITCSIKHQRVQHLSFQLCRLFRLQQLYLPDNKLTGEFPVSLTNCSELRLLNMSSNNLYGRIPMEIGTLKKLEKLSLNKNNYSGEIPSSIWNISSLSILSMGYNYLEGKIPEEIGKLKGLSGFAIGANKLSGELPSSLYNLSSLALFYAAENQFHGSLPSNMFSNLISLQEIGIGGNQISGPIPTSISNASSLQLFDIGYXSFVGKVPNLGNLKDLYWLNLNYNNLGSNSALDLDFITSLINCTELESLVSSSNNFGGVLPNSIGNLSTQLTEISLDFNHIHGTIPETICNNINLITLNLEYNQLTGFVPNSFGKFQKMQLLSLGANHLIGDIPFSFGNLTQLLEIRISNNMLHGKIPPSIGNWQNLLYLDFSGNNFSGAIPVEVFSLSSLSTNLNLSHNSLNGTLPVEVGALGNLGTLDLSNNYLSGQIPMTIGKCTXMEYLXLHGNSFSGMIPSSLASLKGLSHLDLSXNNLSGSIPTDMQRLSLLTYLNVSFNMLEGKVPLEGVFKNATAISIVGNNKLCGGVLQLHLAPCPANVMARSNHHNLKLAIIVICVVVCLILLSIVVVVFLSKKKKRTSSLTASTNQYSMVSYQILHHSTEGFSTSNLIGSGSFGCVYKGFLESEHKFVAIKVINLQMSGAHKSFIAECNALKFIRHRNLVKILTCCSSIDYSGQEFKALVFEYMPNGSLEKWLHPSAEITDRLYTLDLTQRLNIVVDVASALHYLHYGCEQPVVHCDLKPENVLLDDMVAHVTDFGLARLLSMTNGDPHNQSTTTVFKGTIGYAPPEYGMSYEVSMQGDVYSFGILVLEMVTGRRPMEEMFKDDNNLHNYVKMAYSNNLLEIMDSTLLPKQIGEEENYTKKLTMCVFSLIRIGLACSVESPNERMNMADVTRELNLTKDIFLQD* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0437 969 Gene3D Ribonuclease Inhibitor 26 81 IPR032675 -
Amo09g0437 969 Gene3D Ribonuclease Inhibitor 82 295 IPR032675 -
Amo09g0437 969 Gene3D Ribonuclease Inhibitor 296 596 IPR032675 -
Amo09g0437 969 Pfam Protein kinase domain 669 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0437 969 Gene3D Transferase(Phosphotransferase) domain 1 749 966 - -
Amo09g0437 969 ProSiteProfiles Protein kinase domain profile. 667 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0437 969 SUPERFAMILY L domain-like 306 588 - -
Amo09g0437 969 PANTHER LRR RECEPTOR-LIKE KINASE 81 967 - -
Amo09g0437 969 Coils Coil 967 969 - -
Amo09g0437 969 Pfam Leucine rich repeat 505 562 IPR001611 GO:0005515
Amo09g0437 969 Pfam Leucine rich repeat 334 393 IPR001611 GO:0005515
Amo09g0437 969 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Amo09g0437 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Amo09g0437 969 ProSitePatterns Protein kinases ATP-binding region signature. 673 696 IPR017441 GO:0005524
Amo09g0437 969 SMART serkin_6 667 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0437 969 PANTHER OS04G0122200 PROTEIN 81 967 - -
Amo09g0437 969 PANTHER OS04G0122200 PROTEIN 19 79 - -
Amo09g0437 969 PANTHER LRR RECEPTOR-LIKE KINASE 19 79 - -
Amo09g0437 969 SUPERFAMILY L domain-like 31 295 - -
Amo09g0437 969 Gene3D Phosphorylase Kinase; domain 1 647 748 - -
Amo09g0437 969 SUPERFAMILY Protein kinase-like (PK-like) 641 960 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0437 Amo-Chr9 5177378 5180545 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0437 22 968 Receptor kinase-like Gene Family AT3G47570 43.819 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo09g0437 Pkinase 5.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0437 - - ahf:112708871 1310.05