Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0417 ATGGCTTGTCTCTCGCTGCAACTGCTGCTTTTGTGTTTCACCACTCTCACAATTCATGCGACAAAGGTGACATGTGCAGAACCCTACCATCACCGTAGCACCCTTAGAACATTGTCTTCTTCTTCTTCTACCAAATCCTCCTCCAATCATCGTCGGAACCACACTTGGGTGGGACCAATAGGTCAGCGCGTAATCACCGTTGACGTCAACGGCGGTGGACAGTTCCGGTCGGTGCAAGCTGCGGTGAATGCCGTCCCAGACAACAATAGAATGAACATACTGATCCAAATCAGCCCGGGATACTACATAGAGAAGGTTGTTGTGCCCGTGACGAAGCCGTACATAACGTTTGAGGGAGCAGGAAAAGAAGTGACGGTGATAGAATGGCATGATAGGGCCAGCGACCCTGGTCCCAACGGACAGCAACTGCGTACTTACAGAACTGCTTCTGTCACTGTTTTCGCCAACTATTTCTCTGCTCGCAATATCAGCTTCAAGAACACAGCGCCAGCACCAATGCCGGGGATGCATGGCTGGCAAGCGGCGGCGTTTCGAATATCCGGTGACAAAGCATACTTCTCAGGCTGTGGATTCYACGGAGCACAAGACACTCTTTGCGACGACGCTGGCAGGCATTACTTCAAGGACTGCTATATCGAGGGTTCAATTGATTTCATATTTGGGAATGGCAGATCCATGTACAAGGATTGCCAGCTACACTCAATAGCAACGAGATTTGGCTCCATAGCAGCCCATGGTAGGAAACAGGCAGAGGAGAAGACGGGCTTTGCATTCGTGAGATGCAGGGTGACGGGCACAGGCCCGCTCTATGTGGGCAGAGCCATGGGCCAGTACTCCAGAATTGTCTACTCTTACACTTACTTCGATGACATTGTTGCTCATGGCGGCTGGGATGATTGGGACCATGCCAACAATAAGAACAAGTAA 948 0.5074 MACLSLQLLLLCFTTLTIHATKVTCAEPYHHRSTLRTLSSSSSTKSSSNHRRNHTWVGPIGQRVITVDVNGGGQFRSVQAAVNAVPDNNRMNILIQISPGYYIEKVVVPVTKPYITFEGAGKEVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMHGWQAAAFRISGDKAYFSGCGFXGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCQLHSIATRFGSIAAHGRKQAEEKTGFAFVRCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVAHGGWDDWDHANNKNK* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0417 315 SUPERFAMILY Pectin lyase-like 62 312 IPR011050 -
Amo09g0417 315 PANTHER PECTINESTERASE 68-RELATED 31 314 - -
Amo09g0417 315 ProSitePatterns Pectinesterase signature 2. 219 228 IPR033131 -
Amo09g0417 315 Pfam Pectinesterase 65 309 IPR000070 GO:0030599|GO:0042545
Amo09g0417 315 Gene3D - 61 315 IPR012334 -
Amo09g0417 315 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 31 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0417 Amo-Chr9 4855364 4857859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0417 32 315 Carbohydrate Esterase AT5G47500 76.056 3.20e-165 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0417 - - cam:101501763 516.924