Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0393 ATGCATGAAATTGGATTAGATCTTTATTATTTGGACCCAGAGTATATTCACACAGGCCAACTTACTGAGAAAAGTGATGTGTATAGTTTTGGTGTCGTGCTCGCGGAACTGATAATAGGGGAGAAAACAATTCAGGTTGAGAAACCAGAAGGGGGATTTCCCCTTCTTGCTAAGCAGTTCATCTTAACCTTGGAAAAGAATAGCTGGCTTGATATTCTTGAAACTGGGATTGTGAATAAAGAAAATGAAGACGAATTCATCCAAGTTGCTCTACTTGCAGCAAAGTGTTTGAGACTTCATGCAAAAGAAAGGCCTAGCATGGGAATGGTTGCAATGAAGTTGAAGAATATAAGAGAGAAGCATCAAATCAAACACAATTCAGACCTATGTTTGACCAAGAGTCTTCGCTTGTTTGACGATGATCCATCTGGCACATTTGAGCATGGCAGTAGTAGCACTAGCAGTGTCCAACACAGTGGCTACGAATCGTGTACCGATTCAATGCAAGATGGATTGTATTCAGTAATATAA 531 0.3992 MHEIGLDLYYLDPEYIHTGQLTEKSDVYSFGVVLAELIIGEKTIQVEKPEGGFPLLAKQFILTLEKNSWLDILETGIVNKENEDEFIQVALLAAKCLRLHAKERPSMGMVAMKLKNIREKHQIKHNSDLCLTKSLRLFDDDPSGTFEHGSSSTSSVQHSGYESCTDSMQDGLYSVI* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0393 176 Pfam Protein tyrosine and serine/threonine kinase 8 113 IPR001245 GO:0004672|GO:0006468
Amo09g0393 176 Gene3D Transferase(Phosphotransferase) domain 1 1 137 - -
Amo09g0393 176 ProSiteProfiles Protein kinase domain profile. 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0393 176 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 9 8 125 - -
Amo09g0393 176 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 8 125 IPR045274 GO:0007166
Amo09g0393 176 SUPERFAMILY Protein kinase-like (PK-like) 7 119 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0393 Amo-Chr9 4542115 4543151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0393 8 126 Receptor kinase-like Gene Family AT3G25490 46.218 1.17e-24 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo09g0393 PK_Tyr_Ser-Thr 5.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0393 - - ahf:112777838 320.472