Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0392 ATGGAGAACTACAAGGCAAAATTCATGTGCAGCTACGGCGGCAAGATTCAACGCAACACACTCGACCACACTAAGCTCTCCTACGTCGGCGGCCACACCAAGATCCTCTACGTCCACCGCACCACCATAACCTTCCCCGCAATGCTCGCCAAGCTTGCCACCCTCTGCAATGCCGCCTCCGCCTCCGCCGACGTCTCCTTCAAGTACCAGCTTCCCGGCGAGGATCTCGACTCCCTTATCTCCGTCACCGACGATGACGACCTCGAAAACATGATGATCGAGTACGATCAACTCCACAGTGCTTCTCCTAAAACTGCTCGCATGCGACTCTTCCTCTTCCCCAACCTCCCTCTTGATTCTGCTGCCGCTTCATCTGAACCCGAACCCGACCCGGCCGTAAGGCAGGGTGAGGACACGCGCACCAACTTTACTTGCCATCTTCACGAAGCACTGTGCAGAAAGCGAATAAAGACCTTCATCGATTACGAGCTTCACAAAGGCGATGAGATCTCGCCGTCGCTCTTTCGCGCAATCGAGGATTCGTATGTGTCTGTTATCGTCTTCTCGGAGAACTATGCTGACTCCAAGTGGTGCCTTGAAGAACTCGTGAGGATATTGGAGTGTAGAAAAGAATATGGACAGGTTGTTATACCTGTGTTCTATGAGATTGATCCATCACATGTAAGGAAGCAGAATGGAAGTTACAAAGAAGCGTTTGAGAAGAAGCACATGCAAAATTCCATGCTTGATATAAACAAGATTCAAAAATGGAAGGATGCTCTGGCTGAAGCAGCTGATTTGGCTGGCTGGGATTCTCACTCTCGCTCCTATAGGGATGACACTGAACTCATTCAAAGGATTGTCAAAGACGTTTTGCAAAAGCTAATTTACCATTACCCACCCAATGATTTTAACGGCCTTGTTGGTATTCAGGAAAAGTCTGCCCCTTTAGAATCACTACTAAGAGAAGCTCGATCGGTTGGTATATGGGGGATAGGTGGGATAGGCAAAACAACTATTGCGAGATATATATTTGACAAATACTCTCATGGGTTCGAAGGTTCATGCTTCTTGGAAAATATACGGGAAAGATCAGGAGATCATGTGCAAGGACTACATGATTTACGTGATCAACTTTACTCAGTGCTGTTAAATGAAAAAGTTCGCCAAAGTAGCACAGCAAAATCAACTTTTGTTGAGTGCAGGATCCGCAGACAAAGCAATTTCATAGTTCTTGATGATGTGAGTAGTTCAAAGCAGTTGAAATACCTGGTTGGGGAGCTTGAATCCTATGGTCCAGGTAGTAAGATCATCATTACAACTAGAGATAAAAGTGTGCTGCAAAACCGGAGAGTTGAGAAAATACATGAGGTGGAGGGGTTAGATTCCCCTACATCCCTAACATTGTTCAGCTTGAATGCATTTAATGAAGACTCTCCTGAAGTGGGATATAAAGAGCTGTCAAGAAGGGCAGTTAACTATTGCAAAGGTGTCCCCCTAGCCTTAGTAGTGTTGGGTTCTTTCCTTCATTCTAAAACTGAAGCTGAATGGGGAAGTGCGCTGAACAAAATCGAGAAGATTCCCAATGAAGAAATTCAAACTGTGCTAAGGTTGAGTTATGATGAGTTAGATTATGAGGAGCAACAAATATTTCTAGACATTGCGTGTTTTCTTAAGGGAGAGCTAAAAGAAAACATAGTTAGTCTATTAGACAGTTGCAGCCTCTATCCAGTTATTGGCATGAGATCCCTTCTTGATAAGGCTCTCATAACTATATCTAATGATTCTGTAGGGATGCATGACTTGATACAACAAATGGGTTGGGAGATCGTTCGTCAAGAATCTATTGAAAATCCTGAAGATCGTAGTCGCCTGTGGGATCTTGACGATACTTGTGATGTTCTCAAAAACAATAAGGGAACTGGTGCAATTCAAGGCATGAAGTTAGATACATATCAAATTCGACAAAACCTAAGCTTGAGTGTTGACACTTTCAAAAAGATGCCTAATCTAAAATATCTCAAATTCTTTATCTCCATAAGGGATCATGGCAAATTATCTGGTCTGCAGCTTCCTGAGGAGTTGGAGTCTTTTTCTGAGAAATTAAGGCACCTTGAGTGGCATGCATATCCTTTGCCTTCTCTACCATCAAATTTTTGTCCTGAAAAGCTTGTCACTCTTCGAATGCCTAATGGTCAATTTAGAAGACTCTGGAACAAAGTGCAGGATCTTGTTAATCTGAAGGATGTAAACCTAGCTGGATGCCAAGAATTGGTGGAGCTCCCTGATCTGTCTAAGGCAAAAAATCTTAGAAATGTGGATCTCTTTGGCTGTAGAAGTTTAAGCAACATCCATCCATCCATTTTATCTTGCAGCACACTTGAGCGTTTGGATCTAACTGGCTGCTCAAAGCTTGAGACGCTTGAAAGCCAGACTCATTTTAAATCACTTTGGCACCTCAACGTCAGTGGCTGCAAAAGTCTAGCTAAATTTTCTGTGTCTTCAGAAGAAGTTGAAGTCTTGGATTTAATGATGGGAGTCAAAGTGTTACACCCATCCATTGGGCGTTTCAGCAAAGCAAGAATCTTACATGTCGATGGCCATCGACTTGAGAATCTTCCGAAGGAATTGTCTTGTTTGAAATCTCTCGAGACGCTTTCGCTGCATAGATGCAGCCGAGTAAGCTCCAAAGAAAACCTGCATCTCGTATTTAATGGCTTGCAATCATTGCGTGAACTGTATTTTATGGATTGCCATTACTTGTTTGAGCTCCCCGACAATATCAACCAGCTATCGTCGCTACAAAAGTTAGCTTTGGATGGAAGCTATGTGGTGAGGTTGCCGGAGACCATCAAGCATCTTTCAGCACTGGAAACATTGTCATTAAAGGGTTGCAGGAGGCTTCAATCTTTGCCAGAGCTTCCATCATCCATTATTCGTTTGGAAGCAGACAACTGCACATTGTTGCCCATAGCATCATCAAGTTTAACAAATTTTAGGCCGAAAGAAGATGGCAGAAGTGATGATTCATTTCATAATTGTGTGAATTTCCATGTACAGAAACATACTGATTCATTCCATCAATATTTAAGGGACTTAGCGCACCGATATGAGTTAAGAAGGATTAAAAGAAGAGGAGGGGGAGGACGAAGAGCAATGTTTGCAGATATCAATTTCAGAATCTTCTACCAAGACCACAGAATACCAAAGTGGTTCACGTATCAAACAAAGGGAGCTTCCATAACTTTTGAACTTGATCAGCCTTATGATCTCTGTTCTAGTTTCGTTCTCTGCGTTGTTATCGCACCCTGTTGGCCTTCCCCAATCAAATATGGCCTTATTCTTCAGTATCAATGCCACCTGGAAGATAGTGACATGAACAAATATTCAACTAGTAAAATTCTTCTTGATGACGTTCCTGCAGAACGGGATTTTGATCATATTTATATGTCATTTGACCGTGGTGGCATCATAGAGGCAATTAAGGCATACAAATTAAAATACGGAAGTCAGAGCGAGTCTTACAAGGGCAACCTAAAGGTCACAATTGAATTCTATTTCTATTGTTGCACATTTCAGTGGAGTCAGGATCATGATTGGTTGATCAGAGAGTGTGCGGTTTATCCACTTGTTGCCCCTGATTCTCAGTTGAAGCAGGTGGAATTGAAATTGGAGTTGGGCATGGAAAATAAAAGGCCTAGGGGTATTCTTGAGATGGAGCATACTGAAGGTGGGGTTGGAGTTGGAAGCTCCAGTGACCGAGGACCACTCCCTTCCACAAAGAAATTCAAAGAACTATGCTAG 3804 0.4298 MENYKAKFMCSYGGKIQRNTLDHTKLSYVGGHTKILYVHRTTITFPAMLAKLATLCNAASASADVSFKYQLPGEDLDSLISVTDDDDLENMMIEYDQLHSASPKTARMRLFLFPNLPLDSAAASSEPEPDPAVRQGEDTRTNFTCHLHEALCRKRIKTFIDYELHKGDEISPSLFRAIEDSYVSVIVFSENYADSKWCLEELVRILECRKEYGQVVIPVFYEIDPSHVRKQNGSYKEAFEKKHMQNSMLDINKIQKWKDALAEAADLAGWDSHSRSYRDDTELIQRIVKDVLQKLIYHYPPNDFNGLVGIQEKSAPLESLLREARSVGIWGIGGIGKTTIARYIFDKYSHGFEGSCFLENIRERSGDHVQGLHDLRDQLYSVLLNEKVRQSSTAKSTFVECRIRRQSNFIVLDDVSSSKQLKYLVGELESYGPGSKIIITTRDKSVLQNRRVEKIHEVEGLDSPTSLTLFSLNAFNEDSPEVGYKELSRRAVNYCKGVPLALVVLGSFLHSKTEAEWGSALNKIEKIPNEEIQTVLRLSYDELDYEEQQIFLDIACFLKGELKENIVSLLDSCSLYPVIGMRSLLDKALITISNDSVGMHDLIQQMGWEIVRQESIENPEDRSRLWDLDDTCDVLKNNKGTGAIQGMKLDTYQIRQNLSLSVDTFKKMPNLKYLKFFISIRDHGKLSGLQLPEELESFSEKLRHLEWHAYPLPSLPSNFCPEKLVTLRMPNGQFRRLWNKVQDLVNLKDVNLAGCQELVELPDLSKAKNLRNVDLFGCRSLSNIHPSILSCSTLERLDLTGCSKLETLESQTHFKSLWHLNVSGCKSLAKFSVSSEEVEVLDLMMGVKVLHPSIGRFSKARILHVDGHRLENLPKELSCLKSLETLSLHRCSRVSSKENLHLVFNGLQSLRELYFMDCHYLFELPDNINQLSSLQKLALDGSYVVRLPETIKHLSALETLSLKGCRRLQSLPELPSSIIRLEADNCTLLPIASSSLTNFRPKEDGRSDDSFHNCVNFHVQKHTDSFHQYLRDLAHRYELRRIKRRGGGGRRAMFADINFRIFYQDHRIPKWFTYQTKGASITFELDQPYDLCSSFVLCVVIAPCWPSPIKYGLILQYQCHLEDSDMNKYSTSKILLDDVPAERDFDHIYMSFDRGGIIEAIKAYKLKYGSQSESYKGNLKVTIEFYFYCCTFQWSQDHDWLIRECAVYPLVAPDSQLKQVELKLELGMENKRPRGILEMEHTEGGVGVGSSSDRGPLPSTKKFKELC* 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0392 1267 Gene3D - 461 544 IPR042197 -
Amo09g0392 1267 CDD PB1_UP2 9 113 - -
Amo09g0392 1267 Gene3D - 23 114 - -
Amo09g0392 1267 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 290 554 IPR027417 -
Amo09g0392 1267 PRINTS Disease resistance protein signature 495 509 - -
Amo09g0392 1267 PRINTS Disease resistance protein signature 326 341 - -
Amo09g0392 1267 PRINTS Disease resistance protein signature 952 968 - -
Amo09g0392 1267 PRINTS Disease resistance protein signature 402 416 - -
Amo09g0392 1267 SMART PB1_new 21 115 IPR000270 GO:0005515
Amo09g0392 1267 Pfam NB-ARC domain 326 542 IPR002182 GO:0043531
Amo09g0392 1267 Pfam PB1 domain 25 114 IPR000270 GO:0005515
Amo09g0392 1267 Gene3D - 296 456 IPR027417 -
Amo09g0392 1267 SMART till_3 136 267 IPR000157 GO:0007165
Amo09g0392 1267 MobiDBLite consensus disorder prediction 1244 1267 - -
Amo09g0392 1267 SUPERFAMILY Toll/Interleukin receptor TIR domain 136 270 IPR035897 -
Amo09g0392 1267 Gene3D Ribonuclease Inhibitor 644 840 IPR032675 -
Amo09g0392 1267 Gene3D Ribonuclease Inhibitor 841 1001 IPR032675 -
Amo09g0392 1267 Pfam TIR domain 135 309 IPR000157 GO:0007165
Amo09g0392 1267 ProSiteProfiles TIR domain profile. 127 295 IPR000157 GO:0007165
Amo09g0392 1267 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 133 1000 IPR044974 GO:0006952
Amo09g0392 1267 SUPERFAMILY CAD & PB1 domains 24 118 - -
Amo09g0392 1267 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 133 1000 - -
Amo09g0392 1267 Gene3D - 134 295 IPR035897 -
Amo09g0392 1267 SUPERFAMILY L domain-like 599 980 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0392 Amo-Chr9 4537044 4541800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0392 124 996 WRKY Transcription Factor Family AT4G12020 32.772 3.89e-104 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0392 - - ahf:112710162 2473.74