Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0388 TTTAGAGGCAAGGACACTCGCACCAATTTCACTTGCAATCTTCACAGAGCTTTGTCCCAAAAGCAAATAAAAACCTTCATCGATTATGAGCTTCGCAAAGGATATGAGTTATCGCCTGCACTCTCCCCTGTAGTTGATCTATTGGACTGTTGTGGCTTCTATGCGGTTATTGGCATGAGATCCCTTCTTGATAAGGCTCTTATAACTATATCAAGTAACAATACTGTGGAGATGCATGACCTGATACAACAAATGAGTTGGGAAATTGTTCGTCAAGAATCTCCTGGAAAACGTAGTTGTCTGTCGGATTTTGACGATGCTTGTGATGTTTTGAAGAACAATAAAGTAAGAAAAAGAAATCTATGCTTAAGTCCAGACACATTCAAGAAGATGCCTAATTTAAGATATCTCAGATTCTTCACCTCCTTAGACATTGATGGAAGATTATGTGATCTACATATTCCTACAGGGCTAGAGTCACTTCCTGATGAATTAAGGTACCTTGAGTGGCATGCATGCCCTATTCAGTCCTTGCCATCAAATTTTTGCCCAGAAAATCTTGTTACTTTACGCATGCCACACAGTCAATTTAAAAGACTTTGGAGTAATCTTGTTAATTTGAAGGAAGTAGACCTAGCTGAATGCCGTGAGTTGATTGAGCTCCCAGATTTCTCAAGCATATATCTTGAAAGTGTAGATCTCTCCTATTGTAGAAGTTTGCGGCATGTCCACCAAACCATTTTATCTCTTGGCACACTTGGCTATTTGAATCTACACAACTGTAAAAAGATTAAGGCACTTGAAAGTGAAATTCATCTTAGATCTCTTCAGCAACTCCATGTTGAGGGTTGTTCAAGTCTAAGGAAATTTTCTCTGTCTTTAGAAGTGGAGTCATTGAATTTCAGTTCTAGAGTCAAATTATCACACTTATCCGTTGGGTGTCTCAGCAAAGTAAAAGATATCGGAGTAGTGTCCAAGCAAACCCTCCATATCATATTTGATGGCTTGCAATACTTGCTACAATTGACTTTGCTCGACTGTCATGGCCTGTTTGAACTTCCTGACAACATCAACTGCTTATCATCGTTACAAATATTAGAGTTGGATGGAAGTGCTATTGAGAGGTTGCCTGAGAGCATCAAGCATCTTTCAAGGCTTGAAACACTGTCATTGTGGAATTGTAAGAGGCTTCAATGTCTGCCAGAGCTTCCATTATCAATTATTAATTTGAAAGCATTCAACTGCTCATTGGTTCAGATGGTAGCAAATAGTTCAACCAATTCTAGGCCACATTTGGATGAAGGGAAATGCATTCATTTATTCCGTCAAAGTACAAGGAAACTAGTGCATGCATATGAATTTAGACAAAGAGTAGGAGGAAGAGCAATTGGATGGCCTAGATATCTTAGAATCATTTACCCAGACAACAGAATACTAAATTGGTTCACATATCAGACAAAGGGATCTTCCGTAACCTTTGAACTTACTCAGCCTTTGGATCGCTATTTTAGTTTCCTTCTCTGTGTTGTTCTCTCTCTGATCACGACCTCTGATGCTAAATATCTCCAAATCCGCTACAATTGCGGTAGATACTCTAAGGGTAACACTTTTCCAGATAGCTTTGTTATTATGGAGGAGGATTGGGATTTCCATCATGTTTTTATGTCATTCATTCAGGACAGCATCTTGGATCACATAAAGCAACAAAGAGTAAACCAGAGTTCTATCAAAAAAAGAAAAAGAAAACATAACCAGAGCATCTCTTACGGTTGCAACCCAAAGATCACACTTGAATTCTTTACTTGTTGCACACTTGGGAATGTTAACAACTGGTTTATTCAAGAATGCGGGATCTATCCGCTTAGCACACAGAATGTAAGGTTGGAGTTGGAAGACTAG 1899 0.3886 FRGKDTRTNFTCNLHRALSQKQIKTFIDYELRKGYELSPALSPVVDLLDCCGFYAVIGMRSLLDKALITISSNNTVEMHDLIQQMSWEIVRQESPGKRSCLSDFDDACDVLKNNKVRKRNLCLSPDTFKKMPNLRYLRFFTSLDIDGRLCDLHIPTGLESLPDELRYLEWHACPIQSLPSNFCPENLVTLRMPHSQFKRLWSNLVNLKEVDLAECRELIELPDFSSIYLESVDLSYCRSLRHVHQTILSLGTLGYLNLHNCKKIKALESEIHLRSLQQLHVEGCSSLRKFSLSLEVESLNFSSRVKLSHLSVGCLSKVKDIGVVSKQTLHIIFDGLQYLLQLTLLDCHGLFELPDNINCLSSLQILELDGSAIERLPESIKHLSRLETLSLWNCKRLQCLPELPLSIINLKAFNCSLVQMVANSSTNSRPHLDEGKCIHLFRQSTRKLVHAYEFRQRVGGRAIGWPRYLRIIYPDNRILNWFTYQTKGSSVTFELTQPLDRYFSFLLCVVLSLITTSDAKYLQIRYNCGRYSKGNTFPDSFVIMEEDWDFHHVFMSFIQDSILDHIKQQRVNQSSIKKRKRKHNQSISYGCNPKITLEFFTCCTLGNVNNWFIQECGIYPLSTQNVRLELED* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0388 632 Gene3D Ribonuclease Inhibitor 299 449 IPR032675 -
Amo09g0388 632 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 44 524 - -
Amo09g0388 632 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 41 - -
Amo09g0388 632 Gene3D Ribonuclease Inhibitor 110 298 IPR032675 -
Amo09g0388 632 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 44 524 IPR044974 GO:0006952
Amo09g0388 632 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 41 IPR044974 GO:0006952
Amo09g0388 632 SUPERFAMILY L domain-like 78 416 - -
Amo09g0388 632 Pfam TIR domain 1 42 IPR000157 GO:0007165
Amo09g0388 632 Gene3D - 1 51 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0388 Amo-Chr9 4503404 4505809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0388 44 396 WRKY Transcription Factor Family AT4G12020 34.447 4.28e-42 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0388 - - ahf:112710162 514.227