Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0383 ATGCATGCCAGGGATGAGTCTCAACTCATCGAGAATATTGTGAATGATGTATTGCAAAAGCGATGTCTGCGGAGACCCATTGAGCTAAATGGCCTTGTTGGAACCGACGAAATCTGTAAAAATGTAGAAATTTTAATGAAAAGATACAAAGTCATTGGGATTTGGGGCATGCCTGGAATTGGCAAGACAACCATAGCTAATGTGTTGTTTGCCAAACTCTTTCCCCAGTTTGACAAGGTTTGCTATGTAGAAAATGTAAAAGAATATTCACATGATAGGCTTATCTCTAAGCTATTAAAAGAAGAAATTTGCATACCGAATGTTGTTGGATTCCAATATGGTCTAAAAAGGCTTGCCTTCAATGAGATTCACCCTCGAGAGGGTTATGAGGTTCTATCTGCTAGCATGGTAGAGTATGCTGGCGGCGTTCCATTAGCTTTGAGGGTTTTGGGTTCGAGTCTTCGATCGAAACGAGTTGACTTTTGGAAAGGTACTCTCGAGAAACTGAAGAGGTATCCTGATAAGGCTATTCAAGACTTCTACAAAATGAGCTATGATGGATTAGATGAAGAAGAGAAAAAGATATTTCTTGAAATTGCATTTTTTCACAAAGGAGAAGAAAAGGATAGTGTCACAAGCATACTCATGGCCTGTGGGCTTGAAGCAAGGTGTGGAATGGTGGTCCTTCGAGATAAAGCTTTCATATCTATTTCATATAATAATACAATAGAAATCCATGACTTGTTGCAAGAAATTGCGTTTGAAATAGTGCGTCGAGAAAGTAGTGAAGATCCTACAAGACGTAGCCGATTGATGAGGGACACTGAAGAAATTTGTACTATCCTCAAAGATAACAAGGAAGTTAGCAACCTGGAGAGAATTGACTTAAGTGAATGCAAGCAGTTAATAAAGCTTCCAGATTTGTCTAAGGCAAAAAGACTGAGATGGGTGAACCTCTCCGGCTGTGAGAGTTTATGTGCTCTTCATTCATCAGTTTTATCCTCCGACACACTTATAACTTTGATATTAGACAGGTGCATAAATTTACAATATGTTAAGGGCGATAAGCACTTAAAATCTCTAGAGAATATTAGCGTCAATGGTTGCTCAAGTCTGGAGGAATTCGCAGTGTCATCTGATTTGATTGAAAGCTTGGATCTAAGCAACACAAGAATTGAAATGCTAGACACATCAATTGGCCGTCTATGCAAACTTGGAAGCCTCAATCTAGAAGGTTCTCCCGTTAAGCATCTCCCGACCGAGCTATGCTTGACATCGCTTAAGGTCCTAAAGCTCTCGTATGATGGCCTAGTAATCGACAAGCAACAACTTCATGTTCTCTTTGATGGCTTACGTTCTCTACAGATATTGCATCTCAAGGAATGTAGTAATCTCACTGAATTCCCTGACAACATTGGCATCTTGTCAAAATTACAGGAACTAATACTTGATGGAAGCTCTGTGCAGTGCTTGCCTCCGAGCATTAAGCATCTTCAAAGGCTGGAAATTCTGTCCTTGAAGAGTTGCAAGAAGCTCCGGAGTTTGCCAGAGCTTCCACCACTAATCCACGAGTTCTGTGCTGATGACTGCGCCATATTGAAGTCGGTGTCAAACTTGAAGACCTTTTCTAAGAAGATGGTGGGAAAGACGAAACACATTTCGTTCAAGAATAGCTTGAAATTGGAGGAAGAGTCATTGCAGTCTGTTATGAAAAGCCTCCATTTAACAATGATTAAAGCTGTGGCTAACAATGTGGTAGTGAGAAAACACCGCGGAGGCTATAATTATAACAGTATGGAGGTTTGTTTACCAGGAAGCAGAGTTCCAAGAGAGTTCTTGGCATACAAAAAATCAGAGTCTTCATCCATTATCATTACCGAACTTCCTGACTCTGAATGGTTAGGCTTCATTTACTGTGTTGTTCTTTCGCCATCCGAAGGAATAAGGAAGGAAGGCGCTAAGCTTCGATGTCAATGCCAGTTGGTAGGAGGCCAAAAGGGTACATGGTTGAACAAAGCCGTCAGTGAATTGAACTCGGATCATGTTTATGTATGGTATGATCCACTTCATTGCGACAACATTCTTAGATTCCATCCACCAAAGGTTCGCTTTGAGTTTAGTGTTACAACTGATGAAGGGGAAGTGGATGGATCAATCCATATTAAAGAGTGCGGTGTACTCCTCATAAGTTTTTCCCTTGTGGAAAGTGTTTTACAAGAATTGGAGCTGCATTTGCCTGTTGATTTGGTTGAGGAAGAAAATGTGCTGGCCCCTGAGGAGAAGCCAATTGCATGTTATTCTTCTCAACTAGATACGCCTTCAGAAGATAATCAAAATAAATCCATGGATCTTGACAAATCTAAAGGATTACTGCAAGAAAGAAAAAATGCGCTCGTGCAACGAACTGAATGCACCTTACCTTCAAACATGAAAGATGTAGCCAAACAGGCAGAAGTTGAAGGCGACTCTGCAATGGCTGCTCAGTTGTTAGAAAACTTGGAAGGACCGTTATTGGACGATCATGTCCTAACTTTAGACGATCATTCCCTAATGAAAGGCCATGGAGGTCCTGCACTTTTCCGTTGGCTTCAAGATCAAGCGCTTCGTTCGGCGAGCGTTGCAAGATACGCGGAGCAGGTGTTCCAAGCTGCCTCAAGAAGCATCGCTGAGAAAGATGAAGAATTAAGACTTGCGAGAGATGAGGCGGTCAGGAAGCAAGAAAGTTTGAAAATAATGGAGGATAGACTCCAGGATCTAAACTACCAGCTGGCTTCTTGGAGAAGAAAATATGAAGAAGCTCAAGAGAAATGGCGTATAAGGGAAAGTGCGTTGGAGACAGAGGTGGCAATGTTGGTTGCCTCGTTTCAAAATAGTAGGTTGCAGGTTCAAATTCCGTATCCTGACATTAGGAGGAAGGAGCAGATGTTCAGCGATAAGACCAGCTCTGTTTGGGCAGTTAATCAGCATGGCCGCTTCTTTCCAGCTGCTTCTTGGGCACGACCTGAGACGGGCTTCTTCAAAGTGAACTGCGACGGCAGTGTTTTTGAAGATGAGCATAAGGCGGGCTTTGGGTGCGTGCTCAGAGATAGCTCTGGAAGGTGGGTCCGAGGCTGCTGTGGCAAGGTGGCTGTAACTAGTGGGTTGAGATTGGAGCTTTGGAGCTTATGGAGAGGTCTTCTCCTGGCTTTGGAAGCTGGCATCGAGTTCCTTGTGTGTGAAACGGACTCCATGGAAGCCTTCTCTCTGGTTTCAGGTTGGAGGATTCCCAGTGACCATGTGGAGAAGGATCTGGTTATGCGCTTCATTGAGTTGAAGAGACTGCAGGGCTGGACTGTGCGTTTTGGGCTGATAAGGAGAGATGCCAATTCGGTGGCTGATTGGCTTGCTAAGGAAGGGGCTCACGGCGAGGCTGCCTCTACTGTGTGGTTGCACCCACCAGGCCCGCTTCAGCTGCTCCTGCAAAAGGACCTTGCTTAG 3477 0.4354 MHARDESQLIENIVNDVLQKRCLRRPIELNGLVGTDEICKNVEILMKRYKVIGIWGMPGIGKTTIANVLFAKLFPQFDKVCYVENVKEYSHDRLISKLLKEEICIPNVVGFQYGLKRLAFNEIHPREGYEVLSASMVEYAGGVPLALRVLGSSLRSKRVDFWKGTLEKLKRYPDKAIQDFYKMSYDGLDEEEKKIFLEIAFFHKGEEKDSVTSILMACGLEARCGMVVLRDKAFISISYNNTIEIHDLLQEIAFEIVRRESSEDPTRRSRLMRDTEEICTILKDNKEVSNLERIDLSECKQLIKLPDLSKAKRLRWVNLSGCESLCALHSSVLSSDTLITLILDRCINLQYVKGDKHLKSLENISVNGCSSLEEFAVSSDLIESLDLSNTRIEMLDTSIGRLCKLGSLNLEGSPVKHLPTELCLTSLKVLKLSYDGLVIDKQQLHVLFDGLRSLQILHLKECSNLTEFPDNIGILSKLQELILDGSSVQCLPPSIKHLQRLEILSLKSCKKLRSLPELPPLIHEFCADDCAILKSVSNLKTFSKKMVGKTKHISFKNSLKLEEESLQSVMKSLHLTMIKAVANNVVVRKHRGGYNYNSMEVCLPGSRVPREFLAYKKSESSSIIITELPDSEWLGFIYCVVLSPSEGIRKEGAKLRCQCQLVGGQKGTWLNKAVSELNSDHVYVWYDPLHCDNILRFHPPKVRFEFSVTTDEGEVDGSIHIKECGVLLISFSLVESVLQELELHLPVDLVEEENVLAPEEKPIACYSSQLDTPSEDNQNKSMDLDKSKGLLQERKNALVQRTECTLPSNMKDVAKQAEVEGDSAMAAQLLENLEGPLLDDHVLTLDDHSLMKGHGGPALFRWLQDQALRSASVARYAEQVFQAASRSIAEKDEELRLARDEAVRKQESLKIMEDRLQDLNYQLASWRRKYEEAQEKWRIRESALETEVAMLVASFQNSRLQVQIPYPDIRRKEQMFSDKTSSVWAVNQHGRFFPAASWARPETGFFKVNCDGSVFEDEHKAGFGCVLRDSSGRWVRGCCGKVAVTSGLRLELWSLWRGLLLALEAGIEFLVCETDSMEAFSLVSGWRIPSDHVEKDLVMRFIELKRLQGWTVRFGLIRRDANSVADWLAKEGAHGEAASTVWLHPPGPLQLLLQKDLA* 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0383 1158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 197 IPR027417 -
Amo09g0383 1158 Pfam Reverse transcriptase-like 1009 1131 IPR002156 GO:0003676|GO:0004523
Amo09g0383 1158 SUPERFAMILY L domain-like 287 521 - -
Amo09g0383 1158 PRINTS Disease resistance protein signature 286 302 - -
Amo09g0383 1158 PRINTS Disease resistance protein signature 51 66 - -
Amo09g0383 1158 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 119 283 IPR044974 GO:0006952
Amo09g0383 1158 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 283 620 IPR044974 GO:0006952
Amo09g0383 1158 SUPERFAMILY Ribonuclease H-like 1006 1135 IPR012337 -
Amo09g0383 1158 SUPERFAMILY "Winged helix" DNA-binding domain 176 261 IPR036390 -
Amo09g0383 1158 PANTHER NB-ARC DOMAIN PROTEIN 119 283 - -
Amo09g0383 1158 PANTHER NB-ARC DOMAIN PROTEIN 283 620 - -
Amo09g0383 1158 CDD RNase_H_like 1008 1130 IPR044730 -
Amo09g0383 1158 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 103 IPR044974 GO:0006952
Amo09g0383 1158 Coils Coil 881 936 - -
Amo09g0383 1158 Gene3D - 1006 1135 IPR036397 GO:0003676
Amo09g0383 1158 Gene3D Ribonuclease Inhibitor 381 574 IPR032675 -
Amo09g0383 1158 Gene3D Ribonuclease Inhibitor 236 380 IPR032675 -
Amo09g0383 1158 Gene3D - 115 189 IPR042197 -
Amo09g0383 1158 PANTHER NB-ARC DOMAIN PROTEIN 6 103 - -
Amo09g0383 1158 Gene3D - 16 109 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0383 Amo-Chr9 4456212 4465124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0383 286 751 WRKY Transcription Factor Family AT5G45050 24.172 4.67e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0383 - - adu:110275611 1659.43