Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0380 ATGCGTATACTAAAGCATCCCATACTGCCAACAGACCTGGTTGGAATTGAAGAAATCCGTAAGATTGTTAAAGTCAACATGAAGCAACACCGAGTAATTGGAATTTGGGGTATGCGTGGGATAGGGAAGACAACCATCGCTAAAATGTTATTTGCAAAATCCTTTCCTCATTATGACCATGTTTGCTATGCGGAAAATGCAAAAGAGTATACGCCTCAAAGGCTTCTGTCGGAGCTATTGAGGGAACGAATTACCATTGACGCAACAGGGTTTGTCAACAGTATGAGCAGCCTTAGCAATAAGAAAGTTCTCATTATCCTCGACAATGTGAAGGATTCTGATCAACCATTGTTAGAAGCAGTTTGCCAAGGGTACAAGAGCCACAGTCGAGAAAGTAAACTTATTATAACAACAACACATAAGCATTTGCTTGAAAAGAGAGTTGATTGGATATTTGAGGTCAAACAATGGGACGACTCAAAATCTATAGAGCTTCTTAGCCTGAAAGCTTTCGAGGAAACCATCCCTCCAAAGGATTATGAGATTCTGGTGAATAAGATCGTTAAGTATGCCGGGGGAATTCCTTTAGCTCTGAACCTATTGGGTTCATATCTTCGATCCAGAAGCATTGAGTTCTGGGAAAGTACTTTGGAAAAGCTCCAGAAGCATCCTATTAAGCGCATTCAGGCTGCCTTTACGGAGAGTTATGATGAATTGGACGACTTAGACAAGGAGATATTTCTTGACATTGCATTCTTTTTCCATGGAGAAAAGAAAGATCTTGTCACAAGCATATTAAAAGCATGTGAATTCTCACCCAGAAGGGGAATAGAGATCCTTCAAGATAAAGCAATGATTACTACTCTTCCATATAAGGAAACAATCGAAATGCATGGCTTGCTAAGAGAAATGTCTTACGAGATCGTACACGAGGAAAACAGTAAAGACCCTAGAAAACGTAGCCGATTGAAGGATACTAAAGAGAAGACATTTGTGTTGTACTCAAAGAGAACAAGCTTAGTTTACTTTTTTGGTTGCATTGTTTTTCAGAAACCGCTTGATGCAATTGAAGGCATAATATTAGATTTGTCTCAAATTAAAGACTTGCGTTTGAGTCCTGACACATTTAAAAGGATGAATAACTTGAGATTTCTAAAATTATACATCCCCTCGGGTCAGAGTTCTGGTAATATGATCCTTCCTACAGACCTTGAACCATTTTCTGATAAACTAAGGTACTTTGAGTGGCATCAGTACCCTTTCATTTCTCTTCCACCAAGTTTTTATGCTAAGTTACTTGTTGAGATTCGCATGCCGCACAGCCATGTCAAGAAACTCTGGGAGGAAAAGCAGTACCCTGTGCAATTGGAACAGGAACTTAATAATTTAGAAGGAATCGACTTAAGTGAATGCAAAGAGTTAGAAGAGCTTCCAGATTTGTCTGGGGCTAAAAGACTCAGATGGGTGAATCTCTCCGGTTGTGAGACTTTGCCTATTCTTCATTCATCTGTATTTTCCTCCAACACACTTGTTTCTTTGATACTGGATCGGTGTACGAATTTGCAGTGTGTTAAGGCCGAAAGGCATTTGAATTCTCTGCAGCACATAAGTGTCAAAGGCTGCTCAAATCTCAAAGAATTTGTGGTATCGTCAGATTTAATTGAAAACTTGGATTTGAGCAACACAAAGGTTGAAAAGCTGGACAAATCAATCGAGAAATTACAGAAGGTTGAATGCCTCAATCTAGAAGGTTCAAGAGTTAAGCATCTTCCAAAGGAGCTATCAGCCTTAAAATTGCTTAAGGAGTTGAAGCATTCATACAGTGGACTAGAAATTGACAAGCATCAGCTGCAAGGCCTGTTTAACGGTTTATCATCTCTACAAATACTACATTTGAAGGATTGTAGTCACTTGTTTGAATTCCCTGACAACATTGGTTCCTTATCGAAATTGCGCGAGTTAAGGCTAGACGGAAGCAATGTGACCTGGTTGCCTGCAACCATCAAGTGTCTTCAAGAGTTGGAAATTTTGTCCCTAAATAATTGCAAGTTTCTTGAGACACTGCCAGAGCTTCCATCCTCTATCAAGGAGTTCTCTGCTGATAACTGCATCTCATTGGAGTCTGTATCAGCTCTAAACACTCTGGCAACAAAGATGGTGGGAAAGACGAAACGCATCTCCTTCAATAATAGCTTGAAATTGTCGGCCGGACACACATTGCATTCGATCATGGAAAGCATCCATTCAACAATGGTGAGTGCTGTATCTAGCAATGTCACGGTAAGAAGCTATGCAATCGATGTCCATAGCTACAACTACAATAGTGTGGAGGTCTGTTTGCCAGGAGACACAATCCCGGAGCAATTTGCATATAAAACGGAGAAATCCTCCTCCATAACAATTGAACTCCCTGAATCTCCTTCCAATTTTCTTGGCTTTATCTATTCAGTTGTTCTTTCACCGCGTCATGGAATGGAGAAGCACGGTGCCAAGATCCGATGCGAATATAACTTTGCAGGAGGCAAGAATTCTTCGTGGGAGGACATAACTATAAGTGAATTGAACTCGGATCATGTATATATATGGTATGATCCATTCCTCACTGACAAAATTCTTGGACAATACGGGCCAAGTTTTCATCTTGAGTTCAGTGTTGCAACTGACACAGGGGAAGTTGATGACTCAATTATTATTAAAGAGTGTGGTGTCCACATCATAAATGAATTAGAATTGCAGAGATTTTTACTGGAATTAGATAAGAAGAAAAAAGACATGGAGGAGGAATCATCAGCGCAGCATTTACACTTTCATCCACAACATGGATCTCAAGATCACAGCCATGTCCAGACTCCACCTCAAGACAAGAAGAAAGAAAGATTTGATGAGAAGCAGAGCAATGAGATCGAAAACCAGATATCAAAGCAAAAAGGAGAAATGAATGAACAATCATCTTTTGATCGGAAAATCGTTAAAAACAATGTGTTCCAGGACATTTCAAATGAAAATTATTATGATCTGCCAGATAGTATGGAAGAGGCCAAACATTTGGAAGAAAAACTACAAGAAGTTCATCATAACGTCCATGATATGACTGCTGATGAACCATACAAAGAAAAACAAGGGGAACCAATGGATCTTGAAACATCTGAATCTCAAGACCACACTAGCAATGTAGAACAAACGATTGAGCTTGCTCAACCCATTAATTCCTGCATACCTCCACACGGCAAGAAGAGAGCTCCTAAGTTGACTGTGAAAGAACTCCGCCACAAGAAGGCAAAAGTTGAAGGCAACCCTGCAAGAGCAACTCAAGCTACAAATTTAGCAATGGAAACTTCGGATTTTTCCCGTTCGAATATTAAAGGCAAAAGAATAGAAGATATCCATTTGAATCAGGTTCCAGCTCAAAATGCTTCTACTTCTATTGCACAAACTCATGATAAAATTACCATTCCCTCCTTGGATGATCCTCAAGTTGCTCTGGAGTTGCTAAAACACTTCGATGCATCAGCGAAACGCCTCCAAATAACAGAGTTTGTGGACAATCATGTTCTGCATCCATATGATCATTCTATAACAAAAGACCTTGATTCGGCACTTTGTCGTTGGCTTCAAGTTCAAGGGCTTCGTTCAGTGAGCGTTGCGAGATACGCAGAGATGAAATTCGAAGCGGCCAAACGGGAAAGAGAGGAAGAATTAAGACTTGCAAGAGAAGAAAATGCAAAGTTTGAAGAAGCATTGAAAAGAATGGAGGACAGGATTTCACATGTTGAATCGTTGGAGAAAAGAGTTGAGGATTTGAATTCTGAGGTGGCTTCTTGGAGAAGTAAATATGAAGAAACTGAAAAGTCGCTCAAAGAAACCGAAAAGAAACTTGAAGATGAGAAAGATGTAGGAGCTCAGAAAGAAACTCGTTGGAAAAGAAGAGAGAGTGAGCTAATTACGGAAGCGGCAACTTGCTCGTTTGAAAATTGCAGATCGCAGGTTTCCATTTTATACCCTGACATTGATTTAAGTAGGCTTGGACCTTTTAAGGAGATTCAGAATGGGCAGATAGTATCCCCCTCTGATACGGAGGAGACTGAAAGTGAAGAAGACACTAGGGCCTTTGATGATGATGCTCATGGCGATGCCGGTGTCTAG 4143 0.4021 MRILKHPILPTDLVGIEEIRKIVKVNMKQHRVIGIWGMRGIGKTTIAKMLFAKSFPHYDHVCYAENAKEYTPQRLLSELLRERITIDATGFVNSMSSLSNKKVLIILDNVKDSDQPLLEAVCQGYKSHSRESKLIITTTHKHLLEKRVDWIFEVKQWDDSKSIELLSLKAFEETIPPKDYEILVNKIVKYAGGIPLALNLLGSYLRSRSIEFWESTLEKLQKHPIKRIQAAFTESYDELDDLDKEIFLDIAFFFHGEKKDLVTSILKACEFSPRRGIEILQDKAMITTLPYKETIEMHGLLREMSYEIVHEENSKDPRKRSRLKDTKEKTFVLYSKRTSLVYFFGCIVFQKPLDAIEGIILDLSQIKDLRLSPDTFKRMNNLRFLKLYIPSGQSSGNMILPTDLEPFSDKLRYFEWHQYPFISLPPSFYAKLLVEIRMPHSHVKKLWEEKQYPVQLEQELNNLEGIDLSECKELEELPDLSGAKRLRWVNLSGCETLPILHSSVFSSNTLVSLILDRCTNLQCVKAERHLNSLQHISVKGCSNLKEFVVSSDLIENLDLSNTKVEKLDKSIEKLQKVECLNLEGSRVKHLPKELSALKLLKELKHSYSGLEIDKHQLQGLFNGLSSLQILHLKDCSHLFEFPDNIGSLSKLRELRLDGSNVTWLPATIKCLQELEILSLNNCKFLETLPELPSSIKEFSADNCISLESVSALNTLATKMVGKTKRISFNNSLKLSAGHTLHSIMESIHSTMVSAVSSNVTVRSYAIDVHSYNYNSVEVCLPGDTIPEQFAYKTEKSSSITIELPESPSNFLGFIYSVVLSPRHGMEKHGAKIRCEYNFAGGKNSSWEDITISELNSDHVYIWYDPFLTDKILGQYGPSFHLEFSVATDTGEVDDSIIIKECGVHIINELELQRFLLELDKKKKDMEEESSAQHLHFHPQHGSQDHSHVQTPPQDKKKERFDEKQSNEIENQISKQKGEMNEQSSFDRKIVKNNVFQDISNENYYDLPDSMEEAKHLEEKLQEVHHNVHDMTADEPYKEKQGEPMDLETSESQDHTSNVEQTIELAQPINSCIPPHGKKRAPKLTVKELRHKKAKVEGNPARATQATNLAMETSDFSRSNIKGKRIEDIHLNQVPAQNASTSIAQTHDKITIPSLDDPQVALELLKHFDASAKRLQITEFVDNHVLHPYDHSITKDLDSALCRWLQVQGLRSVSVARYAEMKFEAAKREREEELRLAREENAKFEEALKRMEDRISHVESLEKRVEDLNSEVASWRSKYEETEKSLKETEKKLEDEKDVGAQKETRWKRRESELITEAATCSFENCRSQVSILYPDIDLSRLGPFKEIQNGQIVSPSDTEETESEEDTRAFDDDAHGDAGV* 1381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0380 1380 Coils Coil 1222 1305 - -
Amo09g0380 1380 MobiDBLite consensus disorder prediction 1283 1304 - -
Amo09g0380 1380 PANTHER NB-ARC DOMAIN PROTEIN 23 791 - -
Amo09g0380 1380 Gene3D Ribonuclease Inhibitor 355 552 IPR032675 -
Amo09g0380 1380 MobiDBLite consensus disorder prediction 1344 1380 - -
Amo09g0380 1380 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 791 IPR044974 GO:0006952
Amo09g0380 1380 Coils Coil 557 577 - -
Amo09g0380 1380 Pfam C-JID domain 780 910 IPR045344 -
Amo09g0380 1380 PRINTS Disease resistance protein signature 191 205 - -
Amo09g0380 1380 PRINTS Disease resistance protein signature 32 47 - -
Amo09g0380 1380 PRINTS Disease resistance protein signature 458 474 - -
Amo09g0380 1380 PRINTS Disease resistance protein signature 97 111 - -
Amo09g0380 1380 MobiDBLite consensus disorder prediction 926 942 - -
Amo09g0380 1380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 250 IPR027417 -
Amo09g0380 1380 MobiDBLite consensus disorder prediction 949 969 - -
Amo09g0380 1380 Pfam NB-ARC domain 22 240 IPR002182 GO:0043531
Amo09g0380 1380 SUPERFAMILY L domain-like 361 712 - -
Amo09g0380 1380 Gene3D - 7 151 IPR027417 -
Amo09g0380 1380 MobiDBLite consensus disorder prediction 1034 1056 - -
Amo09g0380 1380 Pfam Leucine Rich Repeat 433 451 IPR011713 -
Amo09g0380 1380 Gene3D - 157 240 IPR042197 -
Amo09g0380 1380 Coils Coil 1013 1033 - -
Amo09g0380 1380 MobiDBLite consensus disorder prediction 926 985 - -
Amo09g0380 1380 MobiDBLite consensus disorder prediction 1034 1049 - -
Amo09g0380 1380 Gene3D Ribonuclease Inhibitor 553 760 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0380 Amo-Chr9 4356723 4363109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0380 18 709 WRKY Transcription Factor Family AT5G45050 30.575 5.63e-71 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0380 - - aip:110266592 2455.25