Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0367 ATGGAGAACTACGACGCGAAGTTTCTATGCACCTACGGAGGCGAGATCAAACGCCGCCCTAACGATACCAAGATCTCCTACGTCGGTGGCCTCAACAAGATCCTCTACGTTAACCGTGGAATCGACTTCATCGCCATGCTCGCCGAACTTTCCGCCCTCTTTGACGTCGCCGGCAACATCTGCTTCAAGTACCTACTCCCCAACGATGAACTCGATGCCCTCATCTCCGTCACCGGTGACAACGACCTGAACAACATGATGCTCGAGTATGATAATCTCTACAGAGATTCCCCTAAAATCGCTCGCATAAGGCTCTTCGTCTTCCCTGGCAACCATTTCAATTTGGATCGCAATCCCGCTTCCACCGAAACCCTAAAAACCAAGAAGACAGTCAAACAAAACTCCAAAGTCAACGGCGACAGTTTAGTTGTTGTTCTTCCGCCTCCGCCAGTTGATGTTAAAACAGAGCGGATTGATTGTTCTGATCCGACCCGATTTAATAGCCTGTTATCTGCTGCAAAGTATGATGTGTTTCTGAGCTTCAGAGGCGAAGACACACGCAACGGTTTCACTTCCCATCTTTGTAAAGCTCTGTCGCGAAAGCAGGTAAAGACCTTCGTGGATTTTACTGTTCAGAAGGGAAATGAGATCTCTGCTTCGATCCACCAAGCAATTGAAGAGTCGTTCGTATCGGTGGTTGTGTTCTCGGAGAACTATGCTTCTTCAAAGTGGTGCTTGGAAGAGCTTGTGAAAATAATGGAGTGCAGTAAAGAAAATGGACTGGTTGCTGTTCCTGTGTTCTATAAAATAGATCGATCACATGTGCGGAAGCAGCTTGGAAGTTACAGTGAGGCATTAAAGAAGTTACAAAATAATAGCACGAAGAAGGTTCAGAAATGGAGGGAAGCTCTCACTGAAGCAGCAAATTTATCTGGGTGGGTCTCCAGCTCCTGCAGGGATGAGTCTGAGCTCATTCAAAAGATTGTGAAAGACGTTTTGCAGAAGCTGATTGATCACAACCCACCGAATGATATTAAAAGTTTTGTAGGTATTGACGGAAATCTTAAAGCTATAGATTCGTCGCTAAGAGAAGTCCTTGAAGTCCAAACAAGAATGATTGGAATTTGGGGCATGGGTGGGATAGGAAAGACCACTCTAGCAAAATTTGTATTCGAGAAATACTCTTATCAGTATGAAGGTTCCTGCTTCTTGGAAGATGTTAGAGAAAGATCAGAAAAATATGGACATTCGCTATATGAATTACGCAATGAACTTTACTCAGAGTTGTTGCAGGAAAATAATTGCAAAGACAGCACAAGAAAATCCACCAATGCTAAGGAAAGGCTCCGCAGTCGAAGAATTTTCATAGTTCTTGATGATGTGAGTTGTTCAAAGCAATTAAAATACCTTGCTGGGGAGCATCTATGGTTTGGTGCAGGTAGTAAGATCATTGTCACAGCTACAGACAAGAGTGTATTTGCTCAATGGGAAGATGAAGAAATATATGAGATGAAGGTGTTAAATTCTGAGGACTCCCTTACATTGTTTAGCTTGAATGCATTCAATCAAGACCATCCGAAAATGGGATATGAAAATCTATCATGGGAAGCAGTTAAATATTGTGAAGGTTTACCATTAGCTTTGAAAGTGTTGGGTTCTTTTCTTCGTTCCAAGAGTGAAATTGAATGGGATAGTGCATTGCAAAACATCAAAAAGATTCCTGACGCACCAATTCAAAATGTATTAAGGTTGACCTATGATGGATTAAATTATGAGGAGAGAGAAATTTTTCTAGACATTGCATGTTTTTTTAAGGGATTCCTTAAAGAACATGTAGTTAATCTGTTAGAAAATTGTGGCTTCGATGCAGCTAATGGCATGAGGTCCCTTCATGATAAGTCTCTAATAGCTATATCTGATAATTCTCTGAGGATGCATGACTTGATCCATGAAATGGCTTTGGAAATTGTTCGCAAAGAATCTATCAAAAATCCTGAATATCGTAGCCGTTTGTGGGACTATAATGATATTAGGGATGTTTTGGGAAACAACAAGGGAACCGATGCAATTGAAAGCATAATGTTAGATATGTCTCATATAGATGATCTACAGTTGAGTGCTGACACATTCAAAAAGATGTCTAGATTAAGATTGCTCAAATTGTATGACTCGTCAGAGAAGCATGGTAAATTAAGTAATCTGCAGCTTCCTATAGGGTTGAAGCCATTAAGGTACTTTGAATGGCATGCGTACCCTTTGCCGACTCTGCCATCAAACTTTTGTCCCGAGAAGCTTGTTACCCTCCGTATTCAGAACAGTCAACTTGCAAGACTATGGGATGGAAAGCAGAATCTTGTGAATTTAGAGGAAGTAGATCTAACTGGGTGCCAAAAGTTGGTTGAACTCCCAGATCTCTCTAAAGCAAAAAATCTTAAAAGTGTACAGCTGTCCAACTGTAGAAGTTTGGCCCATGTCCATCCATCTATTTTATCACTTGGCAAGCTTGAGCTTTTGGATCTATTGAATTGCATTAAGCTTGAAATGCTTGGAAACAAGAAGCATTCAAGATCTCTTAAGCACCTGTGCGTTGCTGGCTGCTCAAATTTGTTAGAATTTGCTCTATCTTCAGAAGAAATAGAATACTTGGATTTAAGCCACACTGGCATCAAAGTATTGCACCCATCTATTGGGCGTTTCACCAAAGTGAAAGAGGTATCTCTTTGTGGGATAAGACTTAAGAATCTTCCAGACGGGTTGTCTCGCTTGAAATCTCTTGAGAAACTTTCGCTCTTTAAATGTGGAAGGGTGGTTTCCAAGCAGAAATTACATGATATATTTGATGGCTTGCAATCATTGCAAAAGCTGTCTCTGGTGAACTGTGATAGTCTATTTGAACTCCCTGGAAATGTCAGCCACTTATCATCGTTACAAAAGTTACAGTTGGATGGAAGCCATGTGGACACTTTGCCTGGGAGCATCAAGCATCTTCCAAATCTGAAAACACTCTCATTAATAGGTTGTAAGATGCTTCAATATTTGCCAGAGCTTCCTCCATCCATTCGACATTTGAAGGCCCTAAACTGCACATTGCTGCAAAAAGTAGCATTTGGTTTATTTACTTATGAGCTACAAGAAGAAAAACGCGTAAGTATTTCGTTGCAGAATTGTGTGAATTTGGATGTGGAGAACTGTATTTATTCATTCCTTCAACATGTAAGAAAACAGGCATATGAATGTGAATTTAGGAGGAGAGGAGTAGGAAGAGAAAACATTGTAGTTTGGAGAAGTGACTTCTTTAAAATTTGTTACCCGGACTCCAGAGTACCAGAGTGGTTCACATATCGGGCAGTGGGGTCTTCTATTACTTTTGAAGTTGCTCCTCCTTCCAGTTACTATTTTGGTTCGCTTCTCTGCATTGTTCTCTCTTCGCACAGTTTGGATTTCGAGCTTGATATTAAATGCAGATGCTACTTGGAAGATGGAAAAATGCACAAGTATTCGCTTGGCATATTATTTTTAAGTCACGTTCCAGTGGAAGGGCATTCAGATCATGTTTATATGACGTATAACTTCGGCGGAATCTTCGATGTGATCAAGCTGGACCAATTGAATAATAAGATTGCCTCCTCCGGACATAAACCAAAACTCACCTTTGAATTCTTTGTTAGCAGTGGCATGGCTCGGGGGAAAAAAGATTTAAATTTGTTGATCAAAGAGTGTGGTGTCTATCCGTTAAATGGCTCCAATAATTGCGTGGAATAG 3762 0.408 MENYDAKFLCTYGGEIKRRPNDTKISYVGGLNKILYVNRGIDFIAMLAELSALFDVAGNICFKYLLPNDELDALISVTGDNDLNNMMLEYDNLYRDSPKIARIRLFVFPGNHFNLDRNPASTETLKTKKTVKQNSKVNGDSLVVVLPPPPVDVKTERIDCSDPTRFNSLLSAAKYDVFLSFRGEDTRNGFTSHLCKALSRKQVKTFVDFTVQKGNEISASIHQAIEESFVSVVVFSENYASSKWCLEELVKIMECSKENGLVAVPVFYKIDRSHVRKQLGSYSEALKKLQNNSTKKVQKWREALTEAANLSGWVSSSCRDESELIQKIVKDVLQKLIDHNPPNDIKSFVGIDGNLKAIDSSLREVLEVQTRMIGIWGMGGIGKTTLAKFVFEKYSYQYEGSCFLEDVRERSEKYGHSLYELRNELYSELLQENNCKDSTRKSTNAKERLRSRRIFIVLDDVSCSKQLKYLAGEHLWFGAGSKIIVTATDKSVFAQWEDEEIYEMKVLNSEDSLTLFSLNAFNQDHPKMGYENLSWEAVKYCEGLPLALKVLGSFLRSKSEIEWDSALQNIKKIPDAPIQNVLRLTYDGLNYEEREIFLDIACFFKGFLKEHVVNLLENCGFDAANGMRSLHDKSLIAISDNSLRMHDLIHEMALEIVRKESIKNPEYRSRLWDYNDIRDVLGNNKGTDAIESIMLDMSHIDDLQLSADTFKKMSRLRLLKLYDSSEKHGKLSNLQLPIGLKPLRYFEWHAYPLPTLPSNFCPEKLVTLRIQNSQLARLWDGKQNLVNLEEVDLTGCQKLVELPDLSKAKNLKSVQLSNCRSLAHVHPSILSLGKLELLDLLNCIKLEMLGNKKHSRSLKHLCVAGCSNLLEFALSSEEIEYLDLSHTGIKVLHPSIGRFTKVKEVSLCGIRLKNLPDGLSRLKSLEKLSLFKCGRVVSKQKLHDIFDGLQSLQKLSLVNCDSLFELPGNVSHLSSLQKLQLDGSHVDTLPGSIKHLPNLKTLSLIGCKMLQYLPELPPSIRHLKALNCTLLQKVAFGLFTYELQEEKRVSISLQNCVNLDVENCIYSFLQHVRKQAYECEFRRRGVGRENIVVWRSDFFKICYPDSRVPEWFTYRAVGSSITFEVAPPSSYYFGSLLCIVLSSHSLDFELDIKCRCYLEDGKMHKYSLGILFLSHVPVEGHSDHVYMTYNFGGIFDVIKLDQLNNKIASSGHKPKLTFEFFVSSGMARGKKDLNLLIKECGVYPLNGSNNCVE* 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0367 1253 Gene3D - 334 504 IPR027417 -
Amo09g0367 1253 PRINTS Disease resistance protein signature 372 387 - -
Amo09g0367 1253 PRINTS Disease resistance protein signature 448 462 - -
Amo09g0367 1253 PRINTS Disease resistance protein signature 541 555 - -
Amo09g0367 1253 PRINTS Disease resistance protein signature 783 799 - -
Amo09g0367 1253 CDD PB1_UP2 9 108 - -
Amo09g0367 1253 SUPERFAMILY CAD & PB1 domains 22 114 - -
Amo09g0367 1253 Pfam NB-ARC domain 355 572 IPR002182 GO:0043531
Amo09g0367 1253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 333 600 IPR027417 -
Amo09g0367 1253 ProSiteProfiles TIR domain profile. 173 336 IPR000157 GO:0007165
Amo09g0367 1253 Pfam PB1 domain 21 109 IPR000270 GO:0005515
Amo09g0367 1253 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 167 1177 IPR044974 GO:0006952
Amo09g0367 1253 SUPERFAMILY Toll/Interleukin receptor TIR domain 171 313 IPR035897 -
Amo09g0367 1253 Pfam C-JID domain 1104 1242 IPR045344 -
Amo09g0367 1253 Coils Coil 272 292 - -
Amo09g0367 1253 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 167 1177 - -
Amo09g0367 1253 SMART till_3 174 310 IPR000157 GO:0007165
Amo09g0367 1253 Gene3D - 506 590 IPR042197 -
Amo09g0367 1253 SUPERFAMILY L domain-like 644 1038 - -
Amo09g0367 1253 Gene3D - 171 333 IPR035897 -
Amo09g0367 1253 SMART PB1_new 20 108 IPR000270 GO:0005515
Amo09g0367 1253 Gene3D Ribonuclease Inhibitor 877 1079 IPR032675 -
Amo09g0367 1253 Gene3D Ribonuclease Inhibitor 680 855 IPR032675 -
Amo09g0367 1253 Pfam TIR domain 174 341 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0367 Amo-Chr9 4230406 4234568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0367 171 979 WRKY Transcription Factor Family AT4G12020 34.300 5.65e-104 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0367 - - adu:107472645 2205.64