Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0366 ATGGAGATCGACGAAGCAAAGTTCCTCTGCAGCTACGGCGGCGAGATAAATCCCCGCGGCCACAACAACAAGCTCGCCTACGTCGGTGGCACCAATAAGCTTCTTTATGTTGACCGTAGAATTGACTTCACAGCCATGGTTGCCAAAATCTCCAGCCTCTTTGACGGCGCCTGCAACGGCCATTACTTCTTCAAATACCAAGTCCCCGGCAGCGATGACCTCAATGCTCTCGTCTCCGTCACCAACGACAGAGACCTCCACAACATGATGCTCGTGTTCGATCAACTCTACCGCGACTCCCCTAGATTCCCCCGCATGAGACTCTTCCTCTTCCCAAACCCTAACAAACCTCTCGATTCGGTTAAGCCAGACTCTAATGGGCTATCTTCGAATCTTTGGAAGCATGATGTGTTTATCAGCTGTAGAGGGAAGGACACTCTTACCGGATTCACTTCCCATCTTGTCAAAGCTCTGAATAAAAAACATATAAAAACCTTCACTGGTGATGAGCTTCACAAAGGGGATTGCATCTCGGATTCTCTTACAAGAGCTATTGACAATTCGTCTCTATCTATTGTGATCTTGTCAGAGAATTTTGTTACCTCAAGTTGGTGCGTCGATGAGTTATTGAAAATAATGGCGTGCGGAAGGAAAGTTATACCTGTGTTTTATGGTGTGGATCCATCTGATGTACGAAAGCAGCTAGTGAGTTTCAATGAAAAATTCAAGTCTCACTTGCAGAGTAACATTAACAATCTTCTGAAATGGATGGATGCTCTCGCCAAAGTTGCGGATTTAGAAGGCTGGGATTCCAGCTCTTGTAGGGACGACTTTGAACTTGTGGATAAGATTGTCAAAGATGTTTTGCGAAAGCTGAATAATCCTTGTCTGCCTAAGGATATCAAGGGTGTAGTTGGTATTAATAAAAATCTTGAAAAGTTAGAATTGTTATTAAGTTCGGTTCCTGATGAACAAACGGGAATAATCGGGATTTGTGGGATGGCAGGAGTAGGCAAGACGACTGTAGTGAAGAAATTATTTGAGAAACATTCTTATCGGTATGAAGGTTCCTGTTTCTTAGAAGGTGTTCTGGAAAGATTGGAAAAGTATGGGCAGGAGATAGATGAGTTGTGTAATCAACTTCACTCCAAGTTGTTAGAAGGAAAAGACTTCCCAAATAGCATGGCAGATACAAATTCTGCAAAGTGCTGTCTCTGCAGCAGACAAAGAAGTTTCATAGTTCTTGATGATGTGGGTAGTTCAAAGCAATTAGAATACCTAGTTGGAGACCTTCAATGCTATGGTGCAGGAAGTAGAATAATTGTAATTACAAGGAACAAGAGTGTGCTGGAAAAAAGAGTTGAAAAAATTTATAAGATGGAGGTGTTAGATTTTCAAGATTCCCTTACTCTGTTTAGCTTGAATGCATTCAATCAAAAGTATCCAAAAACGGGATACCAAGAGCTATCATGGAAAGCAGTTACCTACTGCAAAGGTGTCCCGTTAGCTTTAAAAGTATTGGGTTCTTTTCTTCATTCCAAGAGTGAAACTGAATGGGATAGTGCGCTGCAAAAACTCGAGAAGAATCCTAATGCATCAATTCAAAATGTGTCAAGATTGAGTTATGATGGGTCAGATTATCAGCAGAATCACATTGTTTTAGACATTGCAACATCTTTTAAGGGAGAGCAAAAAGAACAGAGAATTGATGTATTAATAAGTTCCCTTCTTGATGAGGCTCTATTAGCTATATATGATCATTTTGAGCTGTTGCAGGATTTGAACAAGAAGTGGGGAGGGGAATCATTTGTCAAAAATCTATCAAGAATCCTGAAAATCATAGCCATTTGTGGGGTTTTGGTGATATTTGTGATGTTTTGGAAAACAGCAAGGTATCGGACATAA 1905 0.4105 MEIDEAKFLCSYGGEINPRGHNNKLAYVGGTNKLLYVDRRIDFTAMVAKISSLFDGACNGHYFFKYQVPGSDDLNALVSVTNDRDLHNMMLVFDQLYRDSPRFPRMRLFLFPNPNKPLDSVKPDSNGLSSNLWKHDVFISCRGKDTLTGFTSHLVKALNKKHIKTFTGDELHKGDCISDSLTRAIDNSSLSIVILSENFVTSSWCVDELLKIMACGRKVIPVFYGVDPSDVRKQLVSFNEKFKSHLQSNINNLLKWMDALAKVADLEGWDSSSCRDDFELVDKIVKDVLRKLNNPCLPKDIKGVVGINKNLEKLELLLSSVPDEQTGIIGICGMAGVGKTTVVKKLFEKHSYRYEGSCFLEGVLERLEKYGQEIDELCNQLHSKLLEGKDFPNSMADTNSAKCCLCSRQRSFIVLDDVGSSKQLEYLVGDLQCYGAGSRIIVITRNKSVLEKRVEKIYKMEVLDFQDSLTLFSLNAFNQKYPKTGYQELSWKAVTYCKGVPLALKVLGSFLHSKSETEWDSALQKLEKNPNASIQNVSRLSYDGSDYQQNHIVLDIATSFKGEQKEQRIDVLISSLLDEALLAIYDHFELLQDLNKKWGGESFVKNLSRILKIIAICGVLVIFVMFWKTARYRT* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0366 634 Gene3D - 131 289 IPR035897 -
Amo09g0366 634 Pfam PB1 domain 23 112 IPR000270 GO:0005515
Amo09g0366 634 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 127 572 IPR044974 GO:0006952
Amo09g0366 634 PRINTS Disease resistance protein signature 328 343 - -
Amo09g0366 634 PRINTS Disease resistance protein signature 405 419 - -
Amo09g0366 634 PRINTS Disease resistance protein signature 497 511 - -
Amo09g0366 634 ProSiteProfiles TIR domain profile. 133 292 IPR000157 GO:0007165
Amo09g0366 634 SUPERFAMILY Toll/Interleukin receptor TIR domain 127 269 IPR035897 -
Amo09g0366 634 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 127 572 - -
Amo09g0366 634 Pfam TIR domain 134 294 IPR000157 GO:0007165
Amo09g0366 634 SMART PB1_new 20 111 IPR000270 GO:0005515
Amo09g0366 634 SUPERFAMILY CAD & PB1 domains 23 120 - -
Amo09g0366 634 Gene3D - 290 462 IPR027417 -
Amo09g0366 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 287 555 IPR027417 -
Amo09g0366 634 Pfam NB-ARC domain 309 538 IPR002182 GO:0043531
Amo09g0366 634 SMART till_3 134 266 IPR000157 GO:0007165
Amo09g0366 634 Gene3D - 463 546 IPR042197 -
Amo09g0366 634 CDD PB1_UP2 9 111 - -
Amo09g0366 634 Coils Coil 360 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0366 Amo-Chr9 4219115 4221550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0366 150 587 WRKY Transcription Factor Family AT4G12020 26.211 5.73e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0366 - - adu:107464449 993.416