Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0334 ATGGCTGCAAAACTTGAAGGAAATGACTCTGACCTGGAGTTGCTTGGAAGGTTGGTCGATTGCCTGTGTGATGTTGGACCTGTGCTTGACGATGCTGAGCTGAAGCAGTTCAGTGATGAAAGAGTGAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATATGGCTGATGACTTGCTTGATGAACTCTCCACCAAAGCCTCCACTGCTGCACCAAGGGATCCAGGTAACTCTAATGACTGGTCTCGCCCTGTTGATTCAATTATTGAAGATAGTGGTGTCAATGTCATTGAAAAAATAGTTGCCAAACTAGAGTCTGTTGTAGGACGAAAAGGTAAACTTCGTCTAAGAGAGAGTGCCAAGGTGGACTTCTCATCATGGAGAATTCCATCCACATCCCTTGTTATAAGTTCTGACGTATTTGGTCGTGATGAAGAAAAGGAGAAGATAATCAAATTGCTGTTAGATGATACCTGCGATGCTGAATCGCGTGTGACTGTGATCCCCATCGTGGGAATGGGCGGAATAGGAAAAACTACTTTGGCTCAACTGGTTTACAATGATGCCAAAGTCGTTGGAAAATTTGACACTAGAGCATGGGTGTGTGTTGCTGAAAATTCTGACCCTATTAATGTTACAAGGACAATAATAGGGGCACTAAATTCTTCTCCCTGTACCATGGATAATTTTGATTCACTTCAGACTGTTTTGATGAAAAAGTTGACAGGAAAGACATTCTTAATTGTTTTAGATGATGTCTGGGACGATCGACGAGACATGTGGGAGGATTTTCTAAAACCTTTTTGGTTTGGGAATAATGGAAGTAAGATTCTCTTAACAACCCGCAGTGAAAATGTTGCTTCTGTGTTTGCAGCTAACAATCTATATCATCGACTAAGTTTATTGTCGGAGGAAGATTGTTGGTCAATGTTTTTGAAGCATTCATCTATTTCTTCTAGTTCTAAACAATATGCAACTCTAGAACCAATTGGTAGAAAAATTGTTGAAAAATGTAAGGGGCTACCTTTGGCTGTAAAGACACTTGGGGGTTTATTGCGTAATAAGTATAATGAAGTGGATTGGGAGAATACACTTGAATGTGAAATTTGGGAACTCTCGGAAGTTGACTGTAAGATTGTTCCTGCATTAAGAGTTAGTTATTATTATCTCCCTTCACATTTAAAGCGGTGTTTTGTTTATTGTTCATTATATCCCAAGGGTTATGAATTTGACAAAGAAGAATTAATTTTGTTATGGATGGCCGAAGATCTTTTACGACCAAAGAAAGCTAACACATTAGAAATGACTGGTTGTACATATTTTGATGAATTAGTTGCGAGGTCTTTTTTCCAACCTTCCAATACTAATGGAAAGTTGTTTGTAATGCATGATCTCATGCATGATTTAGCAACACTTTTTGCTGGGAAATTCTATTTCAAACTCACAGAATTTGGCAATCAACACATGATAGATAACAAAACTCGTCATTTATCAAATACTAGAGCATTCGTTGATAGCATCGAATTAATTCGAGAGGCTGAAGCAATACACATGAGAACATTTTTAGATTTTTCTTTGCTTGCCTATTGTGATTCAGTTAATTTTCAAAGATTTCTACAACATTTGGGATGTTTAAGAGTTTTGTCATTCAAAAATCTCTCTCTAGAGTCATTACCCGATTCAATAGGTGAACTGATTCATTTGCGTTATTTGGATCTCTCTTACATATATTCTATGACATTGCCTGAGTCCATCTTTAAATTGTACAATCTCCAAACTTTGAAGTTGAGGAATTGTCATATGCTTAAGATGCTTCCAAGCCGCATGCAAGAGCTTGTGAACCTGCGGCACCTTGATATTCGAGGTTCTTCTGATCTAGAAGAGATGCCAAAGAAAATGAGCAAGTTAAAGCATCTAAATTTCTTAACTGATTATATTGTCGGCAAGCACGAAGAGAATGGGATAAGAGAATTGGGACCACTGGACAACCTTCATGGCTCATTTTGCATTTCCAACTTGGAGAACGTGAAGAATAGTGTTGAAYCTTTGGAGGCAAYGATGGGTAACAAGAAGRACATCAACACTTTAAAATTWAAATGGCTTCCAAATGGTGACAATGATGACGTTGAAACCGAAAGAGATATTCTTGACAAGTTACAACCTCATCAAAACTTGAAAGAGTTATCAATTAAGGGTTATCCGGGTGAAAGATTCCCAGATTGGTTAGGCCTTTWTTGCTACTCCAATATGACCAAATTGAGTCTGGATAGTTGTATAAATTGTTGTGAGCTTCCTTCACTGGGACAGTTACCCTCTTTACAGCATCTGGAGATTTCTAAACTTGATGGGTTGGAGAAAATTGATTCTGAGTTCTACAACAAAAACAATGCATCATTTCAGGAGAAGACACCCTTCAGATCTCTTGAAACTCTGAAAATTGAGTATATGTATAGTTGGCGGGAGTGGCATTTTCCTGATGAGTTTGATGGTTTTCCTCAGCTTAGAATCCTTGAAATAAGAAGCTGTCCGGTGTTAAGAGGAGATCTGCCTGCTCACCTTCCGGCTCTGGAGGAACTTATCATTGTTGGATGTGAAGAGCTTGCATGTTCGCTGCCAAGGGCTCCCAAGCTTCACGAATTACATGTGCTGAATTCTGGTTTTTATACGGATGCGACCACGCACAATGTAGACATCACAGGAACCCAGCTGGCGAAGTCCGTATTGGAGTGGCTGCCCCACATCCAACCGCCACGCGTCCAACATCTGTTTATCAGTCACTGTTATTCAGCCATATCAATTTCAGCAGATTATGTGCCTGCTTCGTTACAATATCTTGTCATCTGTGATTGTCCAAAATTAACATTCTCAGAGCAACTGCACCACAAGTCACTAACGGAGATAGATGTGTACGATTGTGATTCACTGACGTTGTTTCCATTGGGGGCCCTTCCAAATCTCAAGAAACTCGCAATCCGTGGATGCAAAAACATGGAATATGTTGAGATGCCACAGACTCTTCCAAGTCTCTGTTATATATGGATCACAGAATGTCCCGGTTTAGTATCCCTGCCGGCTCTAGCGTTGGCTGTTCCCCACCTACAGGAGCTGTATATACGCAATTGCCCAGAAATCAATTGTTTTGCTGGGGAGTGCCTCCCGCCGAGTCTGAAAACTCTTCAAGTTGTTAAGTGCCAGAAACTAGAGAGGTGGATAACATCACAGGGTTTGCAGAGTCAAGGCCTTACCCGTCTAATCCTTCACGAATGGAATGAAGTTAAGTCGTTCCCAGGAGAGGGTTCACTTCCTGCTTCTCTTGTGTGTCTAAAATTGTCTACATTCTCAAATCTGGAGACGCTTGATTGCAAGGGGCTTCACCATCTTACCTCCCTCAAAAATTTAGCAATTCGTAACTGTAGAAAGCTTGAGAATATCACAGAAGAACATTTGCTTGCCTCCATAGAAAATATTTACTTAGGGGAAGAATGTCCTTTGAGGCGTAAGTTGGAAGAGATGGAAGACCCACATATTCAATTCGTTACAGAAAAGAACAAAAAAGCAAACCTTTTTTTATCGCTTCTTTGTTGCTTACGGTATTTGCATGGTTTAATGCAGTGGATAACTGTTAATGCTACTATTGATTCTGATTTTGTACCATCTAATATTTGCCCTCATGGAAGATTGAAGAGTCAACATAAATTCATGGCTGAGGCAATGTTTATGAATGGAGCAACTTGCTATACCAATGAATCTCTAGAATCACCTATTATGTCAAGTGAAGAATTTGCTTCTGCTGCAAAGAAAGCAAATAATCAAGAACTATGGGACTATCTCATGATGCTTCTTATAGTAAACTTGACAAGTAAATACTTTGATTTCCTGTATAGGTATTGGGTTCTCAGAGATCCTGAAAGTAGTGTGATTTCTTCCCTGAAACTGTTGAATCTGGGACTAGCAGCCTGTGTGATGCGGAAAAACTGGTAG 3981 0.3976 MAAKLEGNDSDLELLGRLVDCLCDVGPVLDDAELKQFSDERVKKWLVDLQDALYMADDLLDELSTKASTAAPRDPGNSNDWSRPVDSIIEDSGVNVIEKIVAKLESVVGRKGKLRLRESAKVDFSSWRIPSTSLVISSDVFGRDEEKEKIIKLLLDDTCDAESRVTVIPIVGMGGIGKTTLAQLVYNDAKVVGKFDTRAWVCVAENSDPINVTRTIIGALNSSPCTMDNFDSLQTVLMKKLTGKTFLIVLDDVWDDRRDMWEDFLKPFWFGNNGSKILLTTRSENVASVFAANNLYHRLSLLSEEDCWSMFLKHSSISSSSKQYATLEPIGRKIVEKCKGLPLAVKTLGGLLRNKYNEVDWENTLECEIWELSEVDCKIVPALRVSYYYLPSHLKRCFVYCSLYPKGYEFDKEELILLWMAEDLLRPKKANTLEMTGCTYFDELVARSFFQPSNTNGKLFVMHDLMHDLATLFAGKFYFKLTEFGNQHMIDNKTRHLSNTRAFVDSIELIREAEAIHMRTFLDFSLLAYCDSVNFQRFLQHLGCLRVLSFKNLSLESLPDSIGELIHLRYLDLSYIYSMTLPESIFKLYNLQTLKLRNCHMLKMLPSRMQELVNLRHLDIRGSSDLEEMPKKMSKLKHLNFLTDYIVGKHEENGIRELGPLDNLHGSFCISNLENVKNSVEXLEAXMGNKKXINTLKXKWLPNGDNDDVETERDILDKLQPHQNLKELSIKGYPGERFPDWLGLXCYSNMTKLSLDSCINCCELPSLGQLPSLQHLEISKLDGLEKIDSEFYNKNNASFQEKTPFRSLETLKIEYMYSWREWHFPDEFDGFPQLRILEIRSCPVLRGDLPAHLPALEELIIVGCEELACSLPRAPKLHELHVLNSGFYTDATTHNVDITGTQLAKSVLEWLPHIQPPRVQHLFISHCYSAISISADYVPASLQYLVICDCPKLTFSEQLHHKSLTEIDVYDCDSLTLFPLGALPNLKKLAIRGCKNMEYVEMPQTLPSLCYIWITECPGLVSLPALALAVPHLQELYIRNCPEINCFAGECLPPSLKTLQVVKCQKLERWITSQGLQSQGLTRLILHEWNEVKSFPGEGSLPASLVCLKLSTFSNLETLDCKGLHHLTSLKNLAIRNCRKLENITEEHLLASIENIYLGEECPLRRKLEEMEDPHIQFVTEKNKKANLFLSLLCCLRYLHGLMQWITVNATIDSDFVPSNICPHGRLKSQHKFMAEAMFMNGATCYTNESLESPIMSSEEFASAAKKANNQELWDYLMMLLIVNLTSKYFDFLYRYWVLRDPESSVISSLKLLNLGLAACVMRKNW* 1327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0334 1326 Coils Coil 683 685 - -
Amo09g0334 1326 Gene3D - 13 93 - -
Amo09g0334 1326 Coils Coil 673 681 - -
Amo09g0334 1326 PRINTS Disease resistance protein signature 240 254 - -
Amo09g0334 1326 PRINTS Disease resistance protein signature 167 182 - -
Amo09g0334 1326 PRINTS Disease resistance protein signature 610 626 - -
Amo09g0334 1326 PRINTS Disease resistance protein signature 338 352 - -
Amo09g0334 1326 SUPERFAMILY L domain-like 461 883 - -
Amo09g0334 1326 Coils Coil 687 691 - -
Amo09g0334 1326 Gene3D - 386 471 IPR036388 -
Amo09g0334 1326 Gene3D Ribonuclease Inhibitor 889 1223 IPR032675 -
Amo09g0334 1326 PANTHER OS05G0414200 PROTEIN 18 952 - -
Amo09g0334 1326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 401 IPR027417 -
Amo09g0334 1326 PANTHER OS05G0414200 PROTEIN 926 1143 - -
Amo09g0334 1326 Gene3D - 124 294 IPR027417 -
Amo09g0334 1326 Gene3D - 301 385 IPR042197 -
Amo09g0334 1326 PANTHER DISEASE RESISTANCE PROTEIN RP 18 952 IPR044974 GO:0006952
Amo09g0334 1326 PANTHER DISEASE RESISTANCE PROTEIN RP 926 1143 IPR044974 GO:0006952
Amo09g0334 1326 Gene3D Ribonuclease Inhibitor 510 888 IPR032675 -
Amo09g0334 1326 Pfam NB-ARC domain 144 365 IPR002182 GO:0043531
Amo09g0334 1326 Pfam Rx N-terminal domain 17 70 IPR041118 -
Amo09g0334 1326 Coils Coil 693 693 - -
Amo09g0334 1326 SUPERFAMILY L domain-like 917 1159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0334 Amo-Chr9 3852942 3858000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0334 165 647 WRKY Transcription Factor Family AT5G45050 22.222 6.27e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0334 - - ahf:112708719 1635.93