Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0328 ATGCTTTGTATAAGGCTGATGACTTGCTGGATGAACTCGCCACTAGAGCCGCCACTGCCACTCAGAGATCCAGGTAACTCTTCTCCCTGGTCTCACTATGTTGATTCATGTATTGAAGATAGTGCCATCAATGTCATCGAAAAAACAGTTGCCACACTAGAGTCTGTTGTAAAACGAAAAGGTTATCTTCGTCTTCTTCCGAAGGAGAGTGCTAAGATGGACATCTCGTCATGGAGAATTCCGTCCACATCTCTCGTTGTAAGTACTGACATATTTGGTCGGGACCAAGACAAGGAGAACATAATCAAATTGCTGTTAGATGATACCTGCGATGTTGGGTCACCTGTGACTGTGATCCCCATCGTGGGTATGGGTGGAATAGGAAAAACTACTTTGGCTCAATTGGTTTACAGTGATGTCAAAGTCGTGGGAAAATTTGACACTAGAGCATGGGTGTGTGTTGCTGAAAATCCTGACCCTGTTAATGTTACAAAGACAATAATAGGGGCAATAGATTCTTGTCCGGGTAACATGGATAAGTTTGATTCACTTCGGAATAATTTGAAGGAAACGGATAATTTTGATTCACTTCAGACTAATTTGAAAGAAAAGTTGACAGGAAAGACATTTTTAGTTGTCTTAGATGATGTCTGGCATGATCGACGAGACATGTGGGAGGATTTTTTAAAACCTTTTCGTTTTGGGGATAATGGAAGTAAGATTCTTCTAACAACCCGTAATGAAAATGTTGCTTCTGTGTTCACGGCTAGTAATTTACATTATCGACTAAGTTTATTGTTGATTGAAGATTGTTGGTCGATGTTTTTGAAGCATTCATCTATTTCTACTAATTCTAAACAATATGCAACTCTAGAACAAATTGGTAGAAAAATTGTTGAAAAATGTAAGGGGTTACCTTTGGCTGTGAAGACACTTGGGGGTTTATTGCGTAATAAGTTAAATAAAGGAGATTGGGAAAATATACTTGAAAGTGAAATGTGGGAACTCTCGGAAGATGACAGTAAGATTATTCCTGCATTAAGAGTTAGTTATCACTATCTTCCTTCCTATTTGAAGCGGTGTTTTGTTTATTGCTCATTATATCCGGAGGATTATGAATTTGACAAAGACGAATTAATTTTGCTATGGATTGCTGAAGATCTTTTACAACCAAAAGAAAACAACACATTAGAAAAAATTGGTTGTGCATATTTTGATGAATTAGTTGCAAGATCATTCTTTCAACCTTCTAGTGCTAGTGGAAAGTTATTTGTAATGCATGATCTCATGCATGATCTAGCAAAGTTTTTTGCTGGAAAATTCTATTTCAATCTCAAAGAATTTGGCAATCGGCACATGATAGATAGCAAAATTCGACATTTGTCATATACCACAAAATATGAGGACAACTTCAAGTTATTTCAAGAGGACTTTAATGGAACAACACACATGAGAACATTTTTAAATTTTCCTTTGTTTCGCTTTCAAGCATCAATTACTATGGAAAGCGAGTTTTGGCTCTTAGGACAACAATTGGAGTGTTTAAGAGTTTTGTCATTTAAATACATTTTTCTAAAATCATTACCTGATTCAGTAGGTGAATTGATTTATTTGCGTTATTTGAATTTATCTTTCACACTTATRGAGACATTGTCTGAGTCAATATGTAAATTATGCAATCTCCAAACTTTGAAGTTGAGAAAATGTTTAAGGCTAAAGATGCTTCCGAGCTGCATGCAAGATCTTMTGAACCTTTGCCACCTTGATATTCGAGGGGCTTCTCGTCTGAAAGAGATGCCYAAGGGAATGAGCAAGTTAAAGCATCTAAACTTCTTAAGTGATTATATCGTCAGCGAGCAAGAAGAGAATGGGATGCGAGAATTAGGAACATTGGACAATCTTCATGGCTCATTTTGCATTTCCAAKTTGGAGAATGTCAAGAATAGTGGTGAAGCTTTGAAGGCAAAGATGGGTAACAAAAAGCACATCAACACTTTAAAACTGAAATGGGTTCCAGATGGTGACATTGATGATATTGGAATCGAAAGAGATATACTTGACAAGTTGCAACCTCATGAAAACTTGAATAAGTTATCAATTAAGGGTTATCCGGGTGAAAGKTTCCCKGATTGGTTAGGCTTTTCTTGCTACTCCAATATGACCAAATTGAGTRTGGYTTGTTGTATGAATTGTTGTGAGCTTCCTTCACTGGGACAGTTACCCTCTTTACAGCATTTGGAGTTTTCTGATCTTGATCGGTTGGACAAGATTGGTTTGGAGTTTTACAACAAAAATAATGGATCATTTCAGCAGGAGACACCCTTCAAATCTCTCGAAACTCTGAAGATTGAGTATATGTATTGTTGGCGGGAGTGGCATTTTCCTGATGAGTTTGATGGTTTTCCTRAGCTTAGAATCCTTTCAATAAGAAACTGTCCTGTGTTAAGTGGAGATCTGCCTGCTCACCTTCCGGCTCTGGAGGAATTTACAATTGATAGATGTTCAGAGCTTGCATGTTCGCTGCCGAGAGCTCCCAAGCTTCAGCAATTATATCTAGAGAGTTCTCCGGTTTTTACGAATAATGGTGAACCGCAGAAGTTAGTAATTTCAGAAACCCAGCTGGCGCAGTCTGTATTGGAGTACCTGCCCCACATCCAACCCCCAAGTGTCCAATGTCTGGAAATCAAGGACTGTCGGTCAGCGATATCAATTTCAGCAGATTATTTGCCCTCTTCATTACAATATCTGAGAATATCTGACTGTTCAAAATTAACATTCTTAGATCAACTGCAACACAAGTCTCTAAGGGAGATATATGTAGAGGGTTGTGATTCACTGAAGTTGCTTCCATTGGGGGACTTTCCAAATCTCAAGAAACTCYTGATCAGTAAATGCCAAAGCATGGAATGTGTTGTGGTGCCACAGGCTKTTCCAAGTCTCCAATATTTAAGCATCTCAGAGTGTCCCAGTTTAGTATCCTTGCCGGCGCTAACGTTGACTGTTCCCCAGCTAGAGGAGCTGCATATATGTGATTGCCCAGAAYTCYATTGCTTTGCTGAGGAGTTCCTCCCYCCAAGTTTGAAAAKACTTGAAGTCACTAAGTGCCAAAAACTAGCAAGTTGGATAACATCAAAGGGTTTGCAGAGTGAAGGCCTTACCCATCTTTGGCTTGGTCCATGCTTTGATGTAAAATCATTCCCAAGAGATGGTTGCCTTCCTGCTTCTCTTCAGGCTCTAATATTGTCYAACTTTCCAAATCTGGAGACGCTTGACTGCAAGGGGCTTCACCATCTTACCTCCCTCAAAAGTTTAGCAATTACAGACTGTGAAAAGCTTGAGAATATCACAGAACAACATTTGCTTGCTTCCATAGAACATATCTACATAGGGGAAGAATGTCCTTTGAGGTGGAAGCTAGAAGAGATGGAAGACCCACGGATTTAA 3444 0.3879 MLCIRLMTCWMNSPLEPPLPLRDPGNSSPWSHYVDSCIEDSAINVIEKTVATLESVVKRKGYLRLLPKESAKMDISSWRIPSTSLVVSTDIFGRDQDKENIIKLLLDDTCDVGSPVTVIPIVGMGGIGKTTLAQLVYSDVKVVGKFDTRAWVCVAENPDPVNVTKTIIGAIDSCPGNMDKFDSLRNNLKETDNFDSLQTNLKEKLTGKTFLVVLDDVWHDRRDMWEDFLKPFRFGDNGSKILLTTRNENVASVFTASNLHYRLSLLLIEDCWSMFLKHSSISTNSKQYATLEQIGRKIVEKCKGLPLAVKTLGGLLRNKLNKGDWENILESEMWELSEDDSKIIPALRVSYHYLPSYLKRCFVYCSLYPEDYEFDKDELILLWIAEDLLQPKENNTLEKIGCAYFDELVARSFFQPSSASGKLFVMHDLMHDLAKFFAGKFYFNLKEFGNRHMIDSKIRHLSYTTKYEDNFKLFQEDFNGTTHMRTFLNFPLFRFQASITMESEFWLLGQQLECLRVLSFKYIFLKSLPDSVGELIYLRYLNLSFTLXETLSESICKLCNLQTLKLRKCLRLKMLPSCMQDLXNLCHLDIRGASRLKEMPKGMSKLKHLNFLSDYIVSEQEENGMRELGTLDNLHGSFCISXLENVKNSGEALKAKMGNKKHINTLKLKWVPDGDIDDIGIERDILDKLQPHENLNKLSIKGYPGEXFPDWLGFSCYSNMTKLSXXCCMNCCELPSLGQLPSLQHLEFSDLDRLDKIGLEFYNKNNGSFQQETPFKSLETLKIEYMYCWREWHFPDEFDGFPXLRILSIRNCPVLSGDLPAHLPALEEFTIDRCSELACSLPRAPKLQQLYLESSPVFTNNGEPQKLVISETQLAQSVLEYLPHIQPPSVQCLEIKDCRSAISISADYLPSSLQYLRISDCSKLTFLDQLQHKSLREIYVEGCDSLKLLPLGDFPNLKKLLISKCQSMECVVVPQAXPSLQYLSISECPSLVSLPALTLTVPQLEELHICDCPEXXCFAEEFLPPSLKXLEVTKCQKLASWITSKGLQSEGLTHLWLGPCFDVKSFPRDGCLPASLQALILSNFPNLETLDCKGLHHLTSLKSLAITDCEKLENITEQHLLASIEHIYIGEECPLRWKLEEMEDPRI* 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0328 1147 Gene3D Ribonuclease Inhibitor 862 1015 IPR032675 -
Amo09g0328 1147 PRINTS Disease resistance protein signature 204 218 - -
Amo09g0328 1147 PRINTS Disease resistance protein signature 118 133 - -
Amo09g0328 1147 PRINTS Disease resistance protein signature 952 968 - -
Amo09g0328 1147 PRINTS Disease resistance protein signature 302 316 - -
Amo09g0328 1147 Gene3D - 266 349 IPR042197 -
Amo09g0328 1147 SUPERFAMILY L domain-like 879 1130 - -
Amo09g0328 1147 SUPERFAMILY L domain-like 423 898 - -
Amo09g0328 1147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 365 IPR027417 -
Amo09g0328 1147 Gene3D - 72 258 IPR027417 -
Amo09g0328 1147 PANTHER OS05G0414200 PROTEIN 46 927 - -
Amo09g0328 1147 PANTHER OS05G0414200 PROTEIN 921 1114 - -
Amo09g0328 1147 Gene3D - 350 436 IPR036388 -
Amo09g0328 1147 Pfam NB-ARC domain 95 351 IPR002182 GO:0043531
Amo09g0328 1147 PANTHER DISEASE RESISTANCE PROTEIN RP 46 927 IPR044974 GO:0006952
Amo09g0328 1147 PANTHER DISEASE RESISTANCE PROTEIN RP 921 1114 IPR044974 GO:0006952
Amo09g0328 1147 Gene3D Ribonuclease Inhibitor 492 861 IPR032675 -
Amo09g0328 1147 Gene3D Ribonuclease Inhibitor 1018 1127 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0328 Amo-Chr9 3815965 3820778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0328 116 617 WRKY Transcription Factor Family AT5G45050 21.685 7.25e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0328 - - ahf:112709990 1956.03