Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0322 ATACATGGTGGAAGCTTATCCAGGATTGGAATATATCTGCATAATGGTTGTAAGCCACCTATAATTCACAGAGATTTAAAATGCACAAATATTCTATTAAATGAAAACTTCCATGCCAAACTTGCTGATTTTGGATTATCCAAATGTTTTGCGAGTGACGGGGGTACACATGTATCGACAATTGTAGCCGGAACTCCAGGGTACCTAGATCCTGAGTATACGATATCAAATATATTGACAGAGAAAAGTGATGTGTATAATTTTGGAGTAGTTCTTTTAAGGATAATCACAGGTAAAGCACTGATAATAGTAAGAGAAGACATGATTCATCATATAAGTCAACGGGTTAATTCTATGGTTGTTGAAGGAGATATAACAAAAGTTGTTGACTCAAGGTTACAAGGAGATTTTGACAGTAACTCTGCATGGAGAGCGGTTGAAATAGCAATGGCCTCTGTGTCTACCATTTCGATGGAAAGACCATACATAAGTAATATCTCAGATGAATATCTCAGA 516 0.3624 IHGGSLSRIGIYLHNGCKPPIIHRDLKCTNILLNENFHAKLADFGLSKCFASDGGTHVSTIVAGTPGYLDPEYTISNILTEKSDVYNFGVVLLRIITGKALIIVREDMIHHISQRVNSMVVEGDITKVVDSRLQGDFDSNSAWRAVEIAMASVSTISMERPYISNISDEYLR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0322 172 Pfam Protein kinase domain 12 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0322 172 SUPERFAMILY Protein kinase-like (PK-like) 12 152 IPR011009 -
Amo09g0322 172 PANTHER OS07G0107800 PROTEIN-RELATED 12 166 - -
Amo09g0322 172 ProSiteProfiles Protein kinase domain profile. 1 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0322 172 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 12 166 - -
Amo09g0322 172 Gene3D Transferase(Phosphotransferase) domain 1 8 172 - -
Amo09g0322 172 ProSitePatterns Serine/Threonine protein kinases active-site signature. 21 33 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0322 Amo-Chr9 3771439 3772071 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0322 12 166 Receptor kinase-like Gene Family AT1G51850 57.419 8.26e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo09g0322 Pkinase 2.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0322 - - ahf:112708723 290.041