Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0319 GGAGAAAACAATAGGAAAAAGTCCTTGAATTGGAAAGATAGACTTCAAATAGCATTGGATGCAGCCCAAGGATTGGAATATTTGCATAATGGCTGTAAGCCACCTATAATCCACAGAGATATAAAATGCACAAATATTCTATTAGATGAAAACTTCCATGCCAAACTTGCTGATTTTGGATTATCCAAATGCTTTGCGGCTGATGGCGACACACATGTGTGGACAATTGCGGCCGGAACTCCAGGCTATTTAGATCCTGAGTATACGATATCAAATATATTGACAGAGAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATCACAGGTCAACCGGTGATAATAAGAATGGAAGACACGACTCATCATATAAGTCAGCGAGTTAACTCTATGGTTGCTGAAGGGGATATAACAAAAATTGTTGACTCAAGGTTACAAGGAGATTTTGACAATAACTCTGCATGGAGAACAGTTGAAATAGCAATGGCCTCTGTGTCTTCTATTTCGGTAGAAAGGCCATACATGAGTGATATAGTGAAAGAACTAAAGGAGTGTTTGGCTGTAGAGTTAACTCAAAAACATAATAGTTGTGACTTTCAAAATGAAGATTTAATTGGGCAGGTTAGTTTGAACTTGATTAGTACTGATATCAACCCCATAGTTAGGTAG 678 0.3732 GENNRKKSLNWKDRLQIALDAAQGLEYLHNGCKPPIIHRDIKCTNILLDENFHAKLADFGLSKCFAADGDTHVWTIAAGTPGYLDPEYTISNILTEKSDVYSFGVVLLRIITGQPVIIRMEDTTHHISQRVNSMVAEGDITKIVDSRLQGDFDNNSAWRTVEIAMASVSSISVERPYMSDIVKELKECLAVELTQKHNSCDFQNEDLIGQVSLNLISTDINPIVR* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0319 225 SUPERFAMILY Protein kinase-like (PK-like) 6 185 IPR011009 -
Amo09g0319 225 PANTHER OS07G0107800 PROTEIN-RELATED 4 199 - -
Amo09g0319 225 Gene3D Transferase(Phosphotransferase) domain 1 2 210 - -
Amo09g0319 225 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 4 199 - -
Amo09g0319 225 SMART serkin_6 5 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0319 225 ProSiteProfiles Protein kinase domain profile. 1 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0319 225 Pfam Protein kinase domain 5 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0319 225 ProSitePatterns Serine/Threonine protein kinases active-site signature. 36 48 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0319 Amo-Chr9 3755267 3756151 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0319 9 199 Receptor kinase-like Gene Family AT1G51890 57.592 1.59e-75 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo09g0319 Pkinase 1.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0319 - - aip:107614772 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0237 18 3348997 3351167 Amo09g0319 09 3755267 3756151 hybridization