Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0313 ATGGCTTCAAAACTTGAAGGTGGAGCTTATCTCTCTTCTTTTGTTGATGCTATTTCAAACAAGCTGTCTTCAATACTTGAAGATGACTCTGCCCTGGAGTTGCTTGAAAGGTTGGATGAAATTCTGTGTGATGTTGAACCTGTGCTTGATGATGCTGAGCTGAAGCAGTTGAGTGACAAGAGAGTGAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATATGGCTGATGACTTTCTCGAGGAACTCTCCACTAAAGCTGCCACTGCTACTCCGAGGGATCCAGGTAACTCTAATGACTGGTCTCGCGCCGTTGATTCAATCATTGAAGATAGTGGTGTCAATGTCATTGAAAAAATAGTTAGCACACTAGAGTCTCTTGTTAAACGAAAAGATAAACTTGGTCTGGAAAAGAGTGCCAAGTTAGACACATCATGGAGACTTCCATCCACATCTCTCGTTAGTTCTGATGTAATTGGTCGGGACGAAGACAAGGAGAACATAATCAAATTGCTGTTAGATGATACCTGCGATGTTGAATCACTTGTGACTGTGATTCCCATTGTGGGTATGGGCGGGATAGGAAAAACTACTTTGGCTCAATTGGTTTACAATGATGCCAAAGTCATGGGAAAATTTGAAACTAGAGCATGGGTGTGTGTTGCTGAAAATCCTGACCCTGTTCATGTTACAAGGACAATAATAGGGGCAATAGATTCTTCTCCCTGTATCTTGGACAATTTTGATTTACTTCAGACTAATCTGAAGGCAAAATTGACAGGAAAGACCTTCTTGGTTGTTTTAGATGATGTCTGGCATGATCAACGAGACATGTGGGAGGATTTCCTAAAACCTTTTCGTCATGGGAATAATGGGAGTAAGATTCTCCTAACAACCCGTAACGAAAATGTTGCTTCTGTGTTCACACCAAACAATCTACATTATCGACTAAATTTATTGTCGAAAGAAGATTGTTGGTTGTTGTTTTTGAAGCATTCATCTGTTTCTACTAATTCTAAACAATATACAACTCTAGAAAAAATTGGTAAAAAAATTGTTGAAAAGTGTAAAGGATTACCTTTGGCAGTGAAGACACTTGGAGGTTTATTGCGCAACAAGCATAATGAAGGGGATTGGGAGAATGTACTTAAAAGTGAAATCTGGGAACTCTCCAACAGTAAAATTGTTCCTGCATTAAGAGTTAGTTATCATTATCTCCCTTCATATTTGAAGCGGTGTTTTGTTTATTGCTCATTATATCCTCAAGATTATGAATTTGACAAAGACAATTTAATTTTGTTATGGATGGCAGAAGATCTCTTACAACCAAAGAAAAACAACACATTAAAAAATATTGGTTGTGCATATTTTGATGAATTAGTTGCAAGGTCATTTTTTCAACCTTCTAGTACTGAGAGAGGGTTATTTGTAATGCATGATCTCATGCATGATCTAGCAACGTTCTTTGCTGGAAAATTCTATTTCAAACTCGAGGGATCTGAGAATCTACACGGGGTAGATAGCAAAATTCGTCATTTGTCCTTTTCTTCAATATCTTGGGGTATTATCACGTCATTTGGAGAGGCCTGTAAGAGAGCAGTACACTTGAGAACAGCTTTAGATTTTTCTTGGTATCGTCAATCAATTGATGTTGAAAGCAAACCCTGGCTCTTACAACAGCAATTGAGAGTTTTGTCATTTCCTATCAAGTCATTGCCTGAATCAATAGGTGAATTGATTTATTTGCGTTATTTAAATCTGTCTGGAGCATGTATTGTGACATTGCCAGAGTCAATATGTAAATTATACAATCTCCAAACTTTGATATTGGGGACTTGTTATGAGTTAGAGATGCTTCCCAGCCGCATGCAAGATCTTGTGAACCTACAACACCTTGATATTCGAGGTGTTTCTCGTCTGAAAGAGATGCCGAAGAAAATGAGCAAGCTAAAGCATCTAAACTTCTTAAGTTATTATATCATCGGCAAGCATGAAGAGAACGGAATAAGAGAATTGGGAACACTGGACAATCTTCATGGTTCATTTCACATTCTCAACTTGGAGAACGTCAAGAATAGTGATGAAGCTTTGGAGGCAAAGATGGGTAACAAGAAGCACCTCAACACTTTGAAATTGCAATGGTTTCCATTAGGTTACATTTACACCGATCATGTCAAAATACTTGAGGAGTTACAACCTCATGAAAACTTGAAAGAGTTATCAATTGAGGGTTATCACGGAGAAACATTCCCAGGTTGGTTAAGCCTTTCTCGCTACTCCAATATGACCAAATTGAGTCTGAATGATTGTGAGAATTGTTGTGAGCTTCCTTGGCTGGGACAGTTACCCTCTTTACAGCATCTAAAGTTATCTAATTTTTATTCGTTGGTGGAAATTGGTTTAGAGTTTTACAACAAAAACGATGGATCATTTCGGCAGGAAACACCCTTCAAATCTCTTGAAACTCTGAAATTTCACAAAATGTSTAGTTGGGAGGAGTGGCATTTTCCTGATGGGTSTGATGGTTTTCCTAAACTTAGAAGCCTTTCAATGAGATACTGTCTCAAGTTAAGAGGAAGTCTGCCAGCTCAWCTTCRGGCTCTGGAGGAACTTGCCATTGTTGAATGTTCAAAGCTTGTATGTTCGCTGCCGAGGGCTCCCAAGCTTATATGGCACCACACACGTTAG 2688 0.3869 MASKLEGGAYLSSFVDAISNKLSSILEDDSALELLERLDEILCDVEPVLDDAELKQLSDKRVKKWLVDLQDALYMADDFLEELSTKAATATPRDPGNSNDWSRAVDSIIEDSGVNVIEKIVSTLESLVKRKDKLGLEKSAKLDTSWRLPSTSLVSSDVIGRDEDKENIIKLLLDDTCDVESLVTVIPIVGMGGIGKTTLAQLVYNDAKVMGKFETRAWVCVAENPDPVHVTRTIIGAIDSSPCILDNFDLLQTNLKAKLTGKTFLVVLDDVWHDQRDMWEDFLKPFRHGNNGSKILLTTRNENVASVFTPNNLHYRLNLLSKEDCWLLFLKHSSVSTNSKQYTTLEKIGKKIVEKCKGLPLAVKTLGGLLRNKHNEGDWENVLKSEIWELSNSKIVPALRVSYHYLPSYLKRCFVYCSLYPQDYEFDKDNLILLWMAEDLLQPKKNNTLKNIGCAYFDELVARSFFQPSSTERGLFVMHDLMHDLATFFAGKFYFKLEGSENLHGVDSKIRHLSFSSISWGIITSFGEACKRAVHLRTALDFSWYRQSIDVESKPWLLQQQLRVLSFPIKSLPESIGELIYLRYLNLSGACIVTLPESICKLYNLQTLILGTCYELEMLPSRMQDLVNLQHLDIRGVSRLKEMPKKMSKLKHLNFLSYYIIGKHEENGIRELGTLDNLHGSFHILNLENVKNSDEALEAKMGNKKHLNTLKLQWFPLGYIYTDHVKILEELQPHENLKELSIEGYHGETFPGWLSLSRYSNMTKLSLNDCENCCELPWLGQLPSLQHLKLSNFYSLVEIGLEFYNKNDGSFRQETPFKSLETLKFHKMXSWEEWHFPDGXDGFPKLRSLSMRYCLKLRGSLPAXLXALEELAIVECSKLVCSLPRAPKLIWHHTR* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0313 895 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 417 IPR027417 -
Amo09g0313 895 Gene3D - 15 130 - -
Amo09g0313 895 PANTHER DISEASE RESISTANCE PROTEIN RP 28 862 IPR044974 GO:0006952
Amo09g0313 895 Pfam NB-ARC domain 162 385 IPR002182 GO:0043531
Amo09g0313 895 SUPERFAMILY L domain-like 477 875 - -
Amo09g0313 895 Gene3D - 319 401 IPR042197 -
Amo09g0313 895 PRINTS Disease resistance protein signature 624 640 - -
Amo09g0313 895 PRINTS Disease resistance protein signature 185 200 - -
Amo09g0313 895 PRINTS Disease resistance protein signature 356 370 - -
Amo09g0313 895 PRINTS Disease resistance protein signature 258 272 - -
Amo09g0313 895 Gene3D - 402 487 IPR036388 -
Amo09g0313 895 PANTHER OS05G0414200 PROTEIN 28 862 - -
Amo09g0313 895 Pfam Rx N-terminal domain 19 90 IPR041118 -
Amo09g0313 895 Gene3D Ribonuclease Inhibitor 509 894 IPR032675 -
Amo09g0313 895 Gene3D - 143 313 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0313 Amo-Chr9 3701830 3706636 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0313 183 799 WRKY Transcription Factor Family AT5G45050 22.437 2.11e-08 56.2