Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0309 GGAGCTTATCTCTCTTCTTTTGTTGATGCTATCTCAAAGAAGCTATCTTCAATACTTGAAGATGACTCTGTCCTGGAAGGAAATGACTCTGTTCTGGAGTTGCTTGAAAGGTTGGATGAAATTCTGTGTGATGTTGAACATGTGCTTGATGATGCTGAGCTGAAGCAGTTCCGTAACGACAGAGTGAAGAAGTGGCTTGTAGATCTCCAAGATGCTCTCTACATGGCTGATGACTTCCTCGATGAACTCTCCACTAAAGCTGCCATTGCCACTCCAGGACGAAAAGGTAAACTTGGACTGGAAAAGAGTGCCAAGTTGGACACATCTTGGAGAATTCCATCCACATCTCTCGTTGTTAGTTCTGACATAGTTGGTCGGGACGAAGACAAGGAGAACATAATCAAATTGCTGTTAGATGATACCTGCGATGCTGAATCACATGTAACTGTGATTCCCATTGTGGGTATGGGCGGGATAGGAAAAACTACTTTGGCTCAATTGGTTTACAATGATGCCAAAATCATGGGAAAATTTGACACCAGAGTATGGGTGTGTGTTGCTGAAAATCCTAACCCTGTTCATGTTACAAGGACAATAATAGGGGCAATAGATTCTTCTCCCTGTAACAGGGATAACTTTGATTCACTTCAAACTGATTTGAAGAAGAAGTTGACAGGCAAGACCTTTATTGTTGTTTTAGATGATGTTTGGGATGAGCAACGAAACATGTGGGAGAATTTTCTAAAACCTTTTCACTATGGGAATAACGGGAGTAAGATTCTCCTAACAACCCGTAGTGGAAATGTTGCTTCTGTGTTCGCACCTAACAGTCTACATTGCCGACTAAGTTTATTATCGGAGGAAGATTGTTGGAAAGTATTTTTGAAGCATTCATCCATTTCTACTGGTTCTAAACAATATGCAATTCTAGAGCCAATTGGTAGAAAAATTGTTGAAAAGTGTAAGGGGTTACCTTTGGCTGTGAAGACACTTGGGGGTTTATTGCGCAATAAGTATAATGAAGGAGATTGGGAGAATGTACTTGATAGTAAAATTTGGGAACTCTCGGAAGATGTCAGTCCTGCATTAAGAGTTAGTTATCACTACCTTCCTTCACATTTAAAGCGATGTTTTGTTTATTGTTCACTATATCCGGAGGATTATCAATTTGACAAAGACAAATTAATTTTGTTATGGATGGCTGAAGATCTTTTACAACCAAAGGAAAACAACACCTTAGAAAATATTGGTTGTGCATATTTTGATGAATTAGTTGCAAGGTCCTTTTTTCAACCTGTTAGTACTAACAGAAAGTTATTTATAATGCATGATCTTATGCGCGATCTAGCAACATTTTTTGCTGGGAAATTCTATTTCAAACTTAAAGAATTTGGCAATCGATGCATGATAGACAACAAAACTCGTCATTTGTCATATGTTACAAAATTTGAGGATAGCATCAAATTATTTCGAGAGGCCTATAATGGAGCAGTACACCTGAGAACATTTTTAGATTTTACTCTGCTTCGCCGTCGTCAATCAATTGATATTGAAAGCGATTCTTGGCTCTTACAACAACAATTAGGGTGTTTAAGAGTTTTGTCATTTAAACGCTCTTCTATAGAGTCATTGCCTGATTCAATCGGTGAATTGATTCTTGTGCGTTACTTGAATCTCTCTTACGCACCTATTGTGACATTGCCCGAGTCAATATGTAAATTATACAATCTCCAAACTTTGAAGTTAAAGAATTGTGCTTGGTTAAAGATGCTTCCCAGCCGCATGGAAGATCTTGTGAACATGCGTCACCTTGATATTCGAGGAACTTCTCGTTTGAAAGAGATGCCGAAGGGAATGAGCAAGTTAAAGTATCTAAACTTCTTAAGTGATTATATCATCGGCAAGCATGAAGAAAATGGGATAAGAGAACTGGGAACGCTGGACAATCTCCATGGCTCATTTTGCATTTCCAAGTTGGAGAATGTCAAGAATAGCGGTGAAGTTTTGAAGGCAAAGATGGGTAACAAGAAGCATATAAACACTCTAGAATTGAATTGGCTTCCAGATGGTGACATTGATGATGTTCAAACTGAAAGAGATATACTTGGCAAGTTACAACCTCATCAAAACTTGAAAAAGTTATCGATTGTGGGTTATCGGGGTGAAACATTCCCAGATTGGTTAGGCCTTTCATGCTACTCCCATATGACCAAATTGAGTCTGGATCGTTGTATGAATTGTTGTAAGCTTCCTTCGTTGGGACAGTTACCCTCTTTACAGCATCTGAAGTTTTCTAATCTTGATGGGTTGGAGAAAATTGATTTAGAGTTTTACAACAAAAGCAATGCATCATTTCAGCAGGAGACGCCCTTCAAATGTCTTGAAACTCTGAAAATTGTAAATATGTATAGTTGGCGGGAATGGCATTTTCCTTATGAGTTTGATGGTTTTCCTAAGCTTAGAATCCTTTCAATAAAAAGTTGTCCGGTGTTAAAGGGAGGTCTGCCTGCTCACCTTCCGGCTCTGGAGAAACTTGAGATTGTTGAATGTGAAGAGCTTGCATGTCGGCTGCCGAGGGCTCCCAAGCTTCACCAATTACTTGTAGAGGGTTCTTCTACGTCTTACTGGGGAGTGGCACCGCACAACATAGTAATTTCAGGAACCCAGCTGGCGAATTCCGTATTGGAGTGGCTACTACTGCACATCCAACTGCCACGTGTCATTGGTCTGCGTATAATTAACTATGAGTCAGCGATATCAATTTCAGGAGATTATTTGCCGGCTTCATTACAATATCTGGAAATCTCTTCTTGTTCAAAATTAACATTCTCCGAGCACGTGCAACACAAGTCGCTAACGAAGATAGAGGTAAAGGGGTGTGGTTCACTGACGTTGTTTCCAATGGCGGGCTTTCCAAATCTCACGGAACTCGAAATCAGTGAATGCCAAAGCATGGAAAAATTTCATGTTGGGGTACCACAGGCTCTTCCGAATCTCCTTTGTTTAAGGATCTCAAAGTGCCCGAGTCTAGTATCCCTGCCGTCGCTAGGGTTGGCTGCGCCCCACCTACAGGAGCTGTGTATAGAAGATTGCCGAAAAATCGATTGTTTTGCTGAGGAGTGCCTCCCTCCGAGTTTCAAAACTCTTGAGGTCATTGAGTGCGAGAAACTAGCGAGTTGGATTACATCAAATGTTTTGCAGAGTGAATGCCTTACCCATCTTAAGCTTGTTTCATGCTTTGATACAAAGCCGTTCCCAGGAGAGGGTTGCCTTCCTGCTTCTCTTGAGTGTCTTATATTGCGCGAGTTTCCAAATCTGGAGACGCTTGACTGCAAGGGGCTTCACCATCTTACCTCTCTCAAAACTTTAGCAATTGCTGACTGTGAAAAGCTTGAGAATATCACAGAAAAACATCGCCTTGCCTCCATAAAAAATATCTCCATAGGGGAAGAATGTCCTTTGCGGCGTAAGCTGGAAAAGATGGAACACCCACGGATTCAATTCATTCCATGTAAGTGTTTTTGCTCTATGCCCAATGTGTTTTACTTACTTCTCGCTATTATGGATATACACAATCTGAGTATGATGATTTTTCTGATACTCATTCTGCAACATGTAGTGTGCAATGAGCGCGAGTCAGTGGCATTCGGGTACTACGTTTTTCAGCATACTCTTGCTTTGGGTCTTCCAGATTTGCGCTCATGGAATTCGATATGTATTGTTCATCTGACTCTTTTCATTTGCCAAAATAGAATGTTAGTATCCCAATGTTTATTTATGAATGGAGCAACTTGCTATACCAATGAATCTCTTGAACCACCCACTATGTCAATTAAAGAATTTGCTTCTGCTGCAAGGAAAGCAAATACTCAAGGTTACATACTGTTTATGGCTTTTTGTGCTGATATTATGCTTTATTTAAAATTTCCATCATTGCTCAGTCTAAGATTGCAAGAAGATGCATGTCGTTTCGTAGATATGATAATGCAAGCATTCGATGATAAACTAATGGTATTGGCTTCCAATGCTTGGTTGCACCTAGCTAAAATGTCTCAAACTAGAAAATCACCTGCGTCTTTAGTGTGTGGCTTCTTGTAA 4098 0.4017 GAYLSSFVDAISKKLSSILEDDSVLEGNDSVLELLERLDEILCDVEHVLDDAELKQFRNDRVKKWLVDLQDALYMADDFLDELSTKAAIATPGRKGKLGLEKSAKLDTSWRIPSTSLVVSSDIVGRDEDKENIIKLLLDDTCDAESHVTVIPIVGMGGIGKTTLAQLVYNDAKIMGKFDTRVWVCVAENPNPVHVTRTIIGAIDSSPCNRDNFDSLQTDLKKKLTGKTFIVVLDDVWDEQRNMWENFLKPFHYGNNGSKILLTTRSGNVASVFAPNSLHCRLSLLSEEDCWKVFLKHSSISTGSKQYAILEPIGRKIVEKCKGLPLAVKTLGGLLRNKYNEGDWENVLDSKIWELSEDVSPALRVSYHYLPSHLKRCFVYCSLYPEDYQFDKDKLILLWMAEDLLQPKENNTLENIGCAYFDELVARSFFQPVSTNRKLFIMHDLMRDLATFFAGKFYFKLKEFGNRCMIDNKTRHLSYVTKFEDSIKLFREAYNGAVHLRTFLDFTLLRRRQSIDIESDSWLLQQQLGCLRVLSFKRSSIESLPDSIGELILVRYLNLSYAPIVTLPESICKLYNLQTLKLKNCAWLKMLPSRMEDLVNMRHLDIRGTSRLKEMPKGMSKLKYLNFLSDYIIGKHEENGIRELGTLDNLHGSFCISKLENVKNSGEVLKAKMGNKKHINTLELNWLPDGDIDDVQTERDILGKLQPHQNLKKLSIVGYRGETFPDWLGLSCYSHMTKLSLDRCMNCCKLPSLGQLPSLQHLKFSNLDGLEKIDLEFYNKSNASFQQETPFKCLETLKIVNMYSWREWHFPYEFDGFPKLRILSIKSCPVLKGGLPAHLPALEKLEIVECEELACRLPRAPKLHQLLVEGSSTSYWGVAPHNIVISGTQLANSVLEWLLLHIQLPRVIGLRIINYESAISISGDYLPASLQYLEISSCSKLTFSEHVQHKSLTKIEVKGCGSLTLFPMAGFPNLTELEISECQSMEKFHVGVPQALPNLLCLRISKCPSLVSLPSLGLAAPHLQELCIEDCRKIDCFAEECLPPSFKTLEVIECEKLASWITSNVLQSECLTHLKLVSCFDTKPFPGEGCLPASLECLILREFPNLETLDCKGLHHLTSLKTLAIADCEKLENITEKHRLASIKNISIGEECPLRRKLEKMEHPRIQFIPCKCFCSMPNVFYLLLAIMDIHNLSMMIFLILILQHVVCNERESVAFGYYVFQHTLALGLPDLRSWNSICIVHLTLFICQNRMLVSQCLFMNGATCYTNESLEPPTMSIKEFASAARKANTQGYILFMAFCADIMLYLKFPSLLSLRLQEDACRFVDMIMQAFDDKLMVLASNAWLHLAKMSQTRKSPASLVCGFL* 1366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0309 1365 PRINTS Disease resistance protein signature 321 335 - -
Amo09g0309 1365 PRINTS Disease resistance protein signature 969 985 - -
Amo09g0309 1365 PRINTS Disease resistance protein signature 223 237 - -
Amo09g0309 1365 PRINTS Disease resistance protein signature 150 165 - -
Amo09g0309 1365 PANTHER OS05G0414200 PROTEIN 32 943 - -
Amo09g0309 1365 Gene3D Ribonuclease Inhibitor 913 1039 IPR032675 -
Amo09g0309 1365 Gene3D Ribonuclease Inhibitor 1041 1151 IPR032675 -
Amo09g0309 1365 PANTHER DISEASE RESISTANCE PROTEIN RP 32 943 IPR044974 GO:0006952
Amo09g0309 1365 SUPERFAMILY L domain-like 900 1183 - -
Amo09g0309 1365 Gene3D - 366 451 IPR036388 -
Amo09g0309 1365 Gene3D - 8 108 - -
Amo09g0309 1365 Gene3D Ribonuclease Inhibitor 504 890 IPR032675 -
Amo09g0309 1365 Gene3D - 284 365 IPR042197 -
Amo09g0309 1365 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 381 IPR027417 -
Amo09g0309 1365 Pfam NB-ARC domain 127 374 IPR002182 GO:0043531
Amo09g0309 1365 Pfam Rx N-terminal domain 7 88 IPR041118 -
Amo09g0309 1365 Gene3D - 111 277 IPR027417 -
Amo09g0309 1365 SUPERFAMILY L domain-like 442 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0309 Amo-Chr9 3617280 3623037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0309 148 633 WRKY Transcription Factor Family AT5G45050 20.765 1.60e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0309 - - ahf:112708719 2363.96