Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0308 ATGCATGCAATGGCAAAGATGATCGCAAATTCTGTTTTTCTATTGCTTGGAGCTCTTTCTTTCATAGCAACGGTCCAAGGCCAGGATCAATCAGGATTTATTAGCATAGATTGTGGATTACCTGAAAATTCCAATTACACGGAGAAGAACACGGGAATCAATTACATTTCAGATGCTAATTTCATTGATTCTGGTGTGAGTAAAACTGTGTCATCCCAAGATAAGACTACTCATCCACAATATTTTAATTACCTTCGGAGTTTTCCTAATGGAATAAGAAATTGTTACAGAATAAACGTAACAAGTGTTACTAGATATTTAATCAGAGCTAGTTTTTTGTATGGAAACTATGATGGTCTTAATAAGCTTCCAGAGTTTGATCTTTATCTTGGAGTTCATTTCTGGGAGACGGTAAAATTCACAAATTCTTCAGTCAGCATAAACTATGAGATTATCCACACTCTGTCGCTGGATTATATCCATATCTGCTTGGTTAACAAAGGCACAGGGACACCATTCATTTCAGTTATAGAAATGAGGGTTTTGGGCAATCTCGACACTACTTATCGCACTATAGACTCATCTACACGATTGGCACGATTCCGAAGGTTGTATTTTAGTTCTATCACCAACTTAATATACAGGTATCAAGATGATCCCTATGACCGGATATGGGAGCCTTATTGGGAAAACAAGTGGAGACTAATAAGCAGCAACCATAGCAATGATGCCCTTGATCAGGATAACTTTAAACCACCGGCAGTTGTGTTGAAGACTGCAGCCACATCAATAAATGCTACTGCCTCATTAGATTTCCATTGGGACATTGATGACAATGAAACTCAGCACCAATACTATTTCTACCTACACTTCACGGAGCTTCAGCAGTTGGGTGCAGATCATACAAGATCATTCAATATCAACATGGATGGTGAGACTTGGAATACAGTTGAATCACTCAAATACGGAAAAGTATACACCAAACATGTTAGAGGACTTTCCTCTGGATGCAAACAGTGTCGCATTTCACTTATTCGGACAGAATATTCTACCCTTCCACCCATTATCAGTGCTCTTGAGATTTATTTAGCAAAAAATTTCTCATCACAGTCAGGAACCGACAAAGACGACGCGGATGCAGTCACAAACATCAAGATGGCTTATAGGGTGGACAGTAGAAACTGGCAAGGAGATCCATGTCTTCCCGATGCATACAAATGGCAAGGTGTAGACTGTAGCACTATTGATGGCTTTCTAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTCACCGGACATATACCGACTGATATCTCCAAGCTTACTATGTTAAAGTCCTTTGTGGGGCAAAATCCAAATCTTCTATGTGGAATAACTTCATGCACCCTGCAAACAACTGCTACAAGAAAGAAAAAGAATAATGCAGTAATTACAGTGGTAGCATCAATTGCAGGGATATTGCTGCTTCTAGGGATTGCAGCAGTTATAATCTTTCGCCGAAGAAAGACATATGATGCTGCTAACAACTTTGTGCTTGGGAGGCGTCATAATCCAATTAAGGAGTCAGAATTGGAAACTAAGCAACGAGAGTATTCATTTAATGAAGTGGTTAAGATGACCAACAATTTTGATAGGATTCTTGGCAGAGGTGGGTTCGGAACAGTTTACTATGGCTTTATTGAGGACATTGAAGTGGCTGTTAAGATGCTTTCATTATCATCAGTTAAGCTTCTAATGAGGGTGCATCACCGAAATCTGACTTCTCTTATTGGTTATTGCAACGAAGAAACTAACATAGGACTCATCTATGAATACATGAAAAATGGAGATTTAGATGAACATCTTTCAGGAAAAAACAATAGGGGAAAGTCTTTGAACTGGGAAGATAGACTTCGAATAGCAGTAGATGCAGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATTCACAGAGATGTGAAATGTCCAAATATTCTATTAAATGAAAACTTCCATGCCAAACTGGCTGATTTTGGATTATCCAAATGTTTTGCGGCTGAAGGCGATACACATGTGTCAACCAATGTGGCCGGAACTCCAGGCTACCTAGATCCTGAGTACACAACATCAAATAGATTAACAGAAAAAAGTGATGTGTATAGTTTTGGAGTTGTTCTTTTAAGGATAATTACAGGTCAACCGGTGATAATAATAAAGGAAGACACAACTCATCATATAATTGAACGGGTTAATTCAATGATTGCTGAAGGGGATATAACAAAAGTTGTTGACTCAAGGTTACAAGGAGATTTTGACAATAACTCTGCATGGAAAGCGGTTGAAATAGCAATGGCCTCTGTATCTGCCACTTCYGTGCAAAGGCCATACATGAGAGATATAGTGACACAGTTGAAGGACTGTTTGGCTGCAGAGTTAGCCCGAAAACGTAATATTTGTGACCTTCAAAATGAAGATTTAGTTGAACAGTTCAGTAGTCTAAGATTGCAAGAAGATGCATGTCGGTTCGTAGATATGATAATGCAAGCATTCAATGATAAACTAATGGTTCTTGTGCTTCCTGAAAGACATCAGATGTTTGCTTCCAAAAAGACCCTGAAAGCAGTGTGA 2622 0.3879 MHAMAKMIANSVFLLLGALSFIATVQGQDQSGFISIDCGLPENSNYTEKNTGINYISDANFIDSGVSKTVSSQDKTTHPQYFNYLRSFPNGIRNCYRINVTSVTRYLIRASFLYGNYDGLNKLPEFDLYLGVHFWETVKFTNSSVSINYEIIHTLSLDYIHICLVNKGTGTPFISVIEMRVLGNLDTTYRTIDSSTRLARFRRLYFSSITNLIYRYQDDPYDRIWEPYWENKWRLISSNHSNDALDQDNFKPPAVVLKTAATSINATASLDFHWDIDDNETQHQYYFYLHFTELQQLGADHTRSFNINMDGETWNTVESLKYGKVYTKHVRGLSSGCKQCRISLIRTEYSTLPPIISALEIYLAKNFSSQSGTDKDDADAVTNIKMAYRVDSRNWQGDPCLPDAYKWQGVDCSTIDGFLRITSLNLSSSGLTGHIPTDISKLTMLKSFVGQNPNLLCGITSCTLQTTATRKKKNNAVITVVASIAGILLLLGIAAVIIFRRRKTYDAANNFVLGRRHNPIKESELETKQREYSFNEVVKMTNNFDRILGRGGFGTVYYGFIEDIEVAVKMLSLSSVKLLMRVHHRNLTSLIGYCNEETNIGLIYEYMKNGDLDEHLSGKNNRGKSLNWEDRLRIAVDAAQGLEYLHNGCKPPIIHRDVKCPNILLNENFHAKLADFGLSKCFAAEGDTHVSTNVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQPVIIIKEDTTHHIIERVNSMIAEGDITKVVDSRLQGDFDNNSAWKAVEIAMASVSATSVQRPYMRDIVTQLKDCLAAELARKRNICDLQNEDLVEQFSSLRLQEDACRFVDMIMQAFNDKLMVLVLPERHQMFASKKTLKAV* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0308 873 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Amo09g0308 873 Gene3D Phosphorylase Kinase; domain 1 523 606 - -
Amo09g0308 873 PANTHER OS07G0107800 PROTEIN-RELATED 19 448 - -
Amo09g0308 873 SMART serkin_6 542 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0308 873 SUPERFAMILY L domain-like 402 459 - -
Amo09g0308 873 PANTHER OS07G0107800 PROTEIN-RELATED 450 816 - -
Amo09g0308 873 Gene3D Transferase(Phosphotransferase) domain 1 607 827 - -
Amo09g0308 873 Pfam Malectin-like domain 36 362 IPR024788 -
Amo09g0308 873 ProSitePatterns Protein kinases ATP-binding region signature. 548 569 IPR017441 GO:0005524
Amo09g0308 873 PANTHER PUTATIVE-RELATED 450 816 - -
Amo09g0308 873 Gene3D Ribonuclease Inhibitor 376 483 IPR032675 -
Amo09g0308 873 SUPERFAMILY Protein kinase-like (PK-like) 518 802 IPR011009 -
Amo09g0308 873 Pfam Protein tyrosine and serine/threonine kinase 544 801 IPR001245 GO:0004672|GO:0006468
Amo09g0308 873 PANTHER PUTATIVE-RELATED 19 448 - -
Amo09g0308 873 ProSiteProfiles Protein kinase domain profile. 542 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0308 Amo-Chr9 3599016 3607319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0308 6 826 Receptor kinase-like Gene Family AT1G51880 43.856 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo09g0308 Malectin_like 4.4e-102 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0308 - - ahf:112775583 1204.5