Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0269 ATGGTGGCATCATCAGACAATACTAGTAGCCACGGTAGAGATTGTGGAAAGCTTCTTGCCCCATCATCAAAGTCATGTAAGCTACTAAAAAAATATCCGCAAAATAAGAGACGGTTACAGTGTAAGTTTTGCAACAAGAAATTCTCCAATAGCCAAGCTTTGGGAGGGCATCAGAATGCACACAAATTGGAGAGAGCCGCGGTGAAGAGAGACAACATTCTCGCCATGGCGTCTGCTTATATCAACTACTTACCACCATCTCAGTCTAATATGCAAAATTATTATTCAAATTTTTCTGCTTTTAGTCATAGTAGTAGAACATTAGGGATGCAACAACCACCACAAGCAATGATTCATAATAGGTCTTCAATTGCACTTGGACCTGGGTACCTTCATAATGTATTGTTGGAAAATCAAATCATGAATCCTCAACGTAGCAGGCATCATTCGCCGCCGGGACCGGTGTTGCCGCCGCAGGACAGAGAAGTATTGCCGCAAAAAGAATTATTGACAATGAATTTGTTACCACAACAGTCACGGTTGAGTTTAGGTGAAAACATGAATCCAAACCAAACAAATAAACAACAACAACAACCAGGTTTAGAGAATAAAAAACCTCAAGGAGAGATCGATTTGACGCTCAAGCTGTAA 651 0.4071 MVASSDNTSSHGRDCGKLLAPSSKSCKLLKKYPQNKRRLQCKFCNKKFSNSQALGGHQNAHKLERAAVKRDNILAMASAYINYLPPSQSNMQNYYSNFSAFSHSSRTLGMQQPPQAMIHNRSSIALGPGYLHNVLLENQIMNPQRSRHHSPPGPVLPPQDREVLPQKELLTMNLLPQQSRLSLGENMNPNQTNKQQQQPGLENKKPQGEIDLTLKL* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0269 216 MobiDBLite consensus disorder prediction 182 216 - -
Amo09g0269 216 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Amo09g0269 216 Gene3D Classic Zinc Finger 21 81 - -
Amo09g0269 216 SUPERFAMILY beta-beta-alpha zinc fingers 36 66 IPR036236 -
Amo09g0269 216 MobiDBLite consensus disorder prediction 182 203 - -
Amo09g0269 216 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 32 216 IPR044246 GO:0009788
Amo09g0269 216 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0269 Amo-Chr9 3083690 3085933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0269 37 216 C2H2 Transcription Factor Family AT1G80730 29.255 1.18e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Amo09g0269 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0269 - - ahf:112708745 397.512