Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0258 ATGCTAAAATATACAAAAACTCGCACCACCATCGTCACACACTACTACTGCCTCGTCGCCACCGCCGCACCTTGTTGTCGTAATCAGAGCCACCACCGCCGTCTGTTGAAAGCATTCGCGTCCCCGCCAGAACCCTTGCCGTCGTCGTTGCCATTGGACGAAGGAGAGAGGAAAAGATGCGATGTACATAGCAGCTCACTGCCGTGCTTCATCTCGGCCGCTGCCATGGATGCCGGTGAGTTGCACGGTGTCATCGGGCCGTGCCTCTATTCCGGAAAACGGCGCCGTTGTCGCCGGAGAACCACCGTTGAAGCCGCTACTGCTCTGCTGCCGCCCCCACTAGAGGTAGCTACTGGAGCTGCCGCCGGAACCCTTGTCTTCTTGGTTGGTCGTTTAACATTTCTAGTGATGATGGTAGTGATGATGGTGGGTACGGGTTCCGTGTCAAGAAGTGCTGGTTCCCTTAGCGGAATAGTGAGGATGGAAGGCTTAGCTGTGGGTATTAAGATGGAGGACTTTTACGATATTAAAACATTGAAAATTGGTGAAGACATTTACTGGGATGATAGCTCTACTGCTTCAACCGCTGTTTTGATTGATAACCATCTCTATGTTGCTAATGTTGAAGATTATAGGACTATAATATCAAAGGCTGGTAAGGCAATTGCTCTCTGTGAGGATCATAAGCCAAACAGAAGTGATGAACGAAAGAGGAATTGA 720 0.5 MLKYTKTRTTIVTHYYCLVATAAPCCRNQSHHRRLLKAFASPPEPLPSSLPLDEGERKRCDVHSSSLPCFISAAAMDAGELHGVIGPCLYSGKRRRCRRRTTVEAATALLPPPLEVATGAAAGTLVFLVGRLTFLVMMVVMMVGTGSVSRSAGSLSGIVRMEGLAVGIKMEDFYDIKTLKIGEDIYWDDSSTASTAVLIDNHLYVANVEDYRTIISKAGKAIALCEDHKPNRSDERKRN* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0258 239 PANTHER ALPHABET, ISOFORM E-RELATED 177 238 - -
Amo09g0258 239 Pfam Protein phosphatase 2C 187 238 IPR001932 -
Amo09g0258 239 Gene3D - 162 239 IPR036457 -
Amo09g0258 239 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 177 238 - -
Amo09g0258 239 SUPERFAMILY PP2C-like 185 238 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0258 Amo-Chr9 2946765 2949927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0258 175 238 PP2C-type Phosphatase Gene Family AT5G53140 71.875 3.78e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0258 K17506 - adu:107488705 97.0561