Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0254 GATTCTCCCAAGCTCACTCGATCATGCTCAAACCTGGAAAGAAGGGATGTTCTTGGTAATACAATTCATCAATTCCCAGATTTAAAGTCGCAATCTTTCGAGAATTTACAGGAACTTACAGCAGGTAAAGTGGCTGCTAATCTTGAAAGCCCCAGGTCGAGAATTTACAGGAACTCACCTGTTGAACCTTATGTGGGACAGGAGTTTGAGTCAGAAGTAGAGGCACATGTATTCTACAATGCATATGCCACGAGTGTTGGATTCATCGTACGTGTTAGTAAACTCTCGCGATCAAGGATCGATAATTCTACTATTGGGCGGATTTTTGTCTGCAACAAAGAGGGATACAAGATGACTGACAAGCGTGAAAATGTTATACGGCAAAGGGCTGAGACAATGGTTGGTTGCAAGGCAATGATAATGGTAAGGAAAGTAAAATCCGTTAGCTGGGTTGTTACATGTTTTGAACACACACACCCTCTTGCTGGTCCAGGAGGTGGCAGAAGGGATTTCATCTACGAACAATATCCGGGCGAATGGGATAGAATTCGGGAATTAAATCAGCAGTTGACAGCAGAGAAAAAGAGGTCTCACATTGACGTCGACGAGTATAACGAGAGCCTATTGAAGAAAATACAACACATAGTAGACAATGTAAAGGAGATGGAAAGCAAAGAAGAACAAAGTCAATTGAACTTTCAATCAGCCACCCTTTAA 717 0.4212 DSPKLTRSCSNLERRDVLGNTIHQFPDLKSQSFENLQELTAGKVAANLESPRSRIYRNSPVEPYVGQEFESEVEAHVFYNAYATSVGFIVRVSKLSRSRIDNSTIGRIFVCNKEGYKMTDKRENVIRQRAETMVGCKAMIMVRKVKSVSWVVTCFEHTHPLAGPGGGRRDFIYEQYPGEWDRIRELNQQLTAEKKRSHIDVDEYNESLLKKIQHIVDNVKEMESKEEQSQLNFQSATL* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0254 238 Pfam FAR1 DNA-binding domain 78 159 IPR004330 -
Amo09g0254 238 Coils Coil 205 225 - -
Amo09g0254 238 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 45 228 - -
Amo09g0254 238 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 45 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0254 Amo-Chr9 2903725 2905106 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo09g0254 FAR1 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0254 - - aip:107647603 323.553