Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0232 ATGAAGAGGGCCAGAAAGTACGAAGGACATGCAGTGGGAATCGACCTTGGCACAACGTACTCTTGTGTTGCCGTATGGCAGGAACAACACTGTCGAGTGGAGATCATTCATAATGACCAGGGCAACAGAACAACACCTTCCTACGTTGCTTTTACTGCCAATCAGAGGCTAATTGGAGATGCTGCTAAGAACCAAGCTGCCGCTAACCCAATTAACACTGTCTTCGATGTTAAGAGACTCATCGGTAGAAAATATAGTGATCCGGTTATCAAGAATGATCTGTTGATGTGGCCATTTAAGGTCACTGCTGGTGCTGATGACAAACCAATGATTGTTGTTACATACAAGGATCAAGAGAAGCACTTTTCTGCCGAAGAAATTTCATCTATGGTTCTCACTAAAATGCGAGAGATTGCGGAGGCGTACTTAGAGTCACCTGTTTGTAACGCCGTTATTACAGTGCCTGCTTATTTCAATGACTCTCAGCGCAAAGCTACCAGAGATGCTGGCGCCATTGCAGGTCTTAATGTGATGCGAATAATTAGCGAGCCAACGGCTGCTGCTATTGCATATGGACTTGACAAAAGATCCGATTGCACTGGAGAACGAAATATTTTCATCTTTGATCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTTACCATTAAGGGTAAGGTATTCGAAGTCAAGGCTACTGCCGGAAACACTCACCTTGGTGGAGAGGATTTTGATAACAGAATAGTCAGTTACTTTGTTAAAGAATTCAATAGAAAGAACACGGTTGACATTAGTGGTGACGCGAGAGCCTTGAGGAGATTGAGATCTGCTTGTGAGAAGGCGAAGAGGACTTTATCATATGCCGTTACTGCCACCATTGAATTGGATGTTTTCTTTAAAGGAATTGACTTCTATTCATCAATCACGCGTGCTAGATTCGAAGAACTTAATATGGACCTCTTCAGAGAGTGCTTGGAAACGGTAGATCGATGCATCACTGATTCGAATGTGGACAAGGCAAGTGTACATGATGTAGTCCTTGTTGGTGGCTCATCTAGGATACCCAAAGTGCAGGAGTTGCTGCAAGAATTTTTCAACGGAAAGGAGCTCTGTAAGAGCATCAATCCCGATGAAGCTGTTGCATATGGCGCGGCTGTTAAGGCGGCTTTGTTGACTGGGGGTTCTAAGAGTAGTGCCCCAAATTTGGTGCTGCAGGATGTTACTCCTCTGTCTCTTGGTAAAGCCACAATGGGAGATGTCATGAGTGTTGTGATTCCAAGGAATACTACCTTTCCTGTAAAGAAATCAGAAACTTTCTTCACAGTTCAAGACAATCAATCACATGTGCTTGAAGAGATTTATGAAGGTGAGAGGACAAGAGCCAGTGATAACAACTTGCTTGGTCGATATACACTTTCAGGAATCCCTCCTGCTCCTAAGGGCCATCCTGTATCGATATGCTTCGATTTAGATGCCGATGGCATCCTTATTGTGACATCTGAGGAAAAGACTAATGGAAATAAAAACCAGATTACCATAACAAATGATAAAGGAAGATTGTCACAGGAAGAAATTGAAAGGCTTATTGAGGAAGCTGAGAGATACAAGGTTGAAGATGACAAGTTTCTTGAGAAAGCTAATTCAATAATTACTTTGGAGGATTATGTTTATGACATGGAGAAAGCGTTAATCAGTTCTAAGCTTTGTCCCGCGGATAAGAAGAAGCTCAATTCTGCAATTGATAAGGCTATAACTCTGCTTGATGATGGTAACAAGGAGAACATAGAAAATCATGTGTTTGTCGAGTGTCTTAATGAATCTAAGCTCATTTTTGAGCCCATTAGAGCTAAGACTAGATAG 1857 0.4233 MKRARKYEGHAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNRTTPSYVAFTANQRLIGDAAKNQAAANPINTVFDVKRLIGRKYSDPVIKNDLLMWPFKVTAGADDKPMIVVTYKDQEKHFSAEEISSMVLTKMREIAEAYLESPVCNAVITVPAYFNDSQRKATRDAGAIAGLNVMRIISEPTAAAIAYGLDKRSDCTGERNIFIFDLGGGTFDVSLLTIKGKVFEVKATAGNTHLGGEDFDNRIVSYFVKEFNRKNTVDISGDARALRRLRSACEKAKRTLSYAVTATIELDVFFKGIDFYSSITRARFEELNMDLFRECLETVDRCITDSNVDKASVHDVVLVGGSSRIPKVQELLQEFFNGKELCKSINPDEAVAYGAAVKAALLTGGSKSSAPNLVLQDVTPLSLGKATMGDVMSVVIPRNTTFPVKKSETFFTVQDNQSHVLEEIYEGERTRASDNNLLGRYTLSGIPPAPKGHPVSICFDLDADGILIVTSEEKTNGNKNQITITNDKGRLSQEEIERLIEEAERYKVEDDKFLEKANSIITLEDYVYDMEKALISSKLCPADKKKLNSAIDKAITLLDDGNKENIENHVFVECLNESKLIFEPIRAKTR* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0232 618 Pfam Hsp70 protein 11 597 IPR013126 GO:0005524|GO:0140662
Amo09g0232 618 PRINTS 70kDa heat shock protein signature 10 23 - -
Amo09g0232 618 PRINTS 70kDa heat shock protein signature 40 52 - -
Amo09g0232 618 PRINTS 70kDa heat shock protein signature 62 70 - -
Amo09g0232 618 PRINTS 70kDa heat shock protein signature 150 170 - -
Amo09g0232 618 PRINTS 70kDa heat shock protein signature 213 223 - -
Amo09g0232 618 PRINTS 70kDa heat shock protein signature 341 357 - -
Amo09g0232 618 PRINTS 70kDa heat shock protein signature 373 393 - -
Amo09g0232 618 PRINTS 70kDa heat shock protein signature 400 419 - -
Amo09g0232 618 PRINTS 70kDa heat shock protein signature 480 496 - -
Amo09g0232 618 PANTHER HEAT SHOCK PROTEIN 70KDA 6 616 IPR013126 GO:0005524|GO:0140662
Amo09g0232 618 Gene3D - 196 370 - -
Amo09g0232 618 Gene3D - 12 388 - -
Amo09g0232 618 ProSitePatterns Heat shock hsp70 proteins family signature 2. 207 220 IPR018181 -
Amo09g0232 618 ProSitePatterns Heat shock hsp70 proteins family signature 1. 14 21 IPR018181 -
Amo09g0232 618 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 397 548 IPR029047 -
Amo09g0232 618 PANTHER HEAT SHOCK 70 KDA PROTEIN 6 616 - -
Amo09g0232 618 SUPERFAMILY Actin-like ATPase domain 11 195 IPR043129 -
Amo09g0232 618 Coils Coil 517 544 - -
Amo09g0232 618 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 519 596 IPR029048 -
Amo09g0232 618 Gene3D - 75 130 - -
Amo09g0232 618 SUPERFAMILY Actin-like ATPase domain 200 392 IPR043129 -
Amo09g0232 618 Gene3D - 549 618 IPR029048 -
Amo09g0232 618 Gene3D Actin; Chain A, domain 4 239 322 - -
Amo09g0232 618 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 399 545 IPR029047 -
Amo09g0232 618 ProSitePatterns Heat shock hsp70 proteins family signature 3. 344 358 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0232 Amo-Chr9 2680851 2683183 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0232 4 616 Calmodulin-binding Proteins AT3G12580 66.667 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0232 K03283 - gmx:102667578 870.537