Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0229 ATGGCTAGAAAGTACGAAGGACATGCAGTGGGAATCGACCTTGGCACAACGTACTCTTGTGTTGCCGTATGGCAGGAACAACACTGTCGATTGGAGATCATTCATAATGACCAGGGCAACAGAACAACACCTTCCTACGTTGCTTTTACTGCCAATCAGAGGTTAATCGGAGATGCTGCTAAGAACCAAGCTGCCGCTAACCCAATTAACAGTGTCTTCGATGTTAAGAGACTCATCGGTAGAAAATATAGTGATCCGGTTATCAAGAATGATCTGTTGATGTGGCCATTTAAGGTCACTGCTGGTGCTGATGACAAACCAATGATTGTTGTTACATACAAGGATCAAGAGAAGCAMTTTTCYGCMGAAGAAATYTCATCTATGGTTCTCAYTAARATGCGAGAGATTGCGGAGGCRTSCTTAGAGTCACCTGTTTGTAAYGCYGTTATTACAGTGCCTGCSTATTTCAATGRMTCTCAGCGCAAAGCTACCAGAKATGCTGGWGCCATTGCAGGCCTCAATGTGATGCGAATAATTAGCGAGCCAACTGCTGCGGCTATTGCATATGGCCTTTACAAGAGATCGAATTGCGCCGGAGAGCGTAATATATTCATCTTTGATCTTGGAGGTGGTACTTTCGATGTGTCTCTCCTTACTATTAAGGGGAAGGTCTTCCAAGTTAAGGCTACTGCCGGAAACACTCACCTCGGGGGAGAGGATTTTGATAACAGAGTAGTGAATTACTTTGTAAATGAATTCAAAAGAAAGAACAAGGTTGACATTGGTGGCGATGCCAGAGCCTTGAGGAGACTGAGAACTGCTTGTGAGAAGGCAAAGAGGACTTTATCATTTGCCGTTACTGCCACCATTGAGTTAGATGCTTTCTTTAAAGGAGTTGACATCTATTCATCAATAACGCGTGCTAGATTCGAAGAACTTAATATGGACCTCTTTAGAGAGTGCTTGGAAACGGTAGATCGATGCATCACTGATTCGAATGTGGAGAAATCAAGTATTCATGATGTGGTGCTTGTTGGAGTTGTTGCATATGGCGCGGCTGTTACGGCTGCTTTGTTGAGTGGAGGCACTAAGAGTAGTGCCCCAGACTTGGTGCTGCAGGATGTTACTCCTCTGTCTCTTGGTGTACGGACAAGAGGAGATGTAATGACTGTTGTGATTCCAAGGAATACTAACATTCCTGTAAAGAAATCACGAAATCTCTTCACGGTTGAAGATAACCAATTGGATATGGTGAAAAGAATTTATGAAGGTGAGAGGACAAGAGCCAGCGATAACAACTTGCTCGGTCTATACACACTTCATGGCATCCCTCCTGCTCCGAAAGGCCATCCTGTATCGATATGCTTCGATTTAGATGCCGACGGCATCCTATGTGTAACTTCTGAGGAAAAGACCACCGGCAATAAAAACCAGATTACCATAACAAATGATAAAGGAAGATTATCGCAGGAAGAAATCGAAAGGCTCATTGAGGAAGCTGAGAGATACAAGGTTGAAGATGAGAATTTTCTTGAGAAAGCAAATGCAATACGTGCTTTGGAAGATTATGTTTATGACATGGAGAAAGCCTCAATCGGTTCTAAGCTTTGTCCTGAGGATAAGAAGAAGGAGAACATAGAAACTGATGTGTTTGTGGAGCATCTAAATGAAGCTAAGCTCATTTTTGAGCCCATTATAGCTAAGACTAGATAG 1713 0.4273 MARKYEGHAVGIDLGTTYSCVAVWQEQHCRLEIIHNDQGNRTTPSYVAFTANQRLIGDAAKNQAAANPINSVFDVKRLIGRKYSDPVIKNDLLMWPFKVTAGADDKPMIVVTYKDQEKXFSAEEISSMVLXKMREIAEAXLESPVCNAVITVPAYFNXSQRKATRXAGAIAGLNVMRIISEPTAAAIAYGLYKRSNCAGERNIFIFDLGGGTFDVSLLTIKGKVFQVKATAGNTHLGGEDFDNRVVNYFVNEFKRKNKVDIGGDARALRRLRTACEKAKRTLSFAVTATIELDAFFKGVDIYSSITRARFEELNMDLFRECLETVDRCITDSNVEKSSIHDVVLVGVVAYGAAVTAALLSGGTKSSAPDLVLQDVTPLSLGVRTRGDVMTVVIPRNTNIPVKKSRNLFTVEDNQLDMVKRIYEGERTRASDNNLLGLYTLHGIPPAPKGHPVSICFDLDADGILCVTSEEKTTGNKNQITITNDKGRLSQEEIERLIEEAERYKVEDENFLEKANAIRALEDYVYDMEKASIGSKLCPEDKKKENIETDVFVEHLNEAKLIFEPIIAKTR* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0229 570 PANTHER HEAT SHOCK 70 KDA PROTEIN 348 546 - -
Amo09g0229 570 Pfam Hsp70 protein 9 346 IPR013126 GO:0005524|GO:0140662
Amo09g0229 570 Pfam Hsp70 protein 347 549 IPR013126 GO:0005524|GO:0140662
Amo09g0229 570 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Amo09g0229 570 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Amo09g0229 570 PRINTS 70kDa heat shock protein signature 369 388 - -
Amo09g0229 570 PRINTS 70kDa heat shock protein signature 8 21 - -
Amo09g0229 570 PRINTS 70kDa heat shock protein signature 60 68 - -
Amo09g0229 570 PRINTS 70kDa heat shock protein signature 211 221 - -
Amo09g0229 570 PRINTS 70kDa heat shock protein signature 38 50 - -
Amo09g0229 570 PRINTS 70kDa heat shock protein signature 449 465 - -
Amo09g0229 570 PRINTS 70kDa heat shock protein signature 148 168 - -
Amo09g0229 570 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 362 536 IPR029047 -
Amo09g0229 570 Gene3D - 194 350 - -
Amo09g0229 570 SUPERFAMILY Actin-like ATPase domain 200 359 IPR043129 -
Amo09g0229 570 Gene3D Actin; Chain A, domain 4 237 320 - -
Amo09g0229 570 Gene3D - 10 193 - -
Amo09g0229 570 Coils Coil 486 513 - -
Amo09g0229 570 Gene3D - 73 128 - -
Amo09g0229 570 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 346 - -
Amo09g0229 570 PANTHER HEAT SHOCK PROTEIN 70KDA 348 546 IPR013126 GO:0005524|GO:0140662
Amo09g0229 570 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Amo09g0229 570 PANTHER HEAT SHOCK PROTEIN 70KDA 4 346 IPR013126 GO:0005524|GO:0140662
Amo09g0229 570 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 368 519 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0229 Amo-Chr9 2637531 2639754 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0229 1 568 Calmodulin-binding Proteins AT3G12580 60.940 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0229 K03283 - gmx:102667578 752.666