Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0223 ATGAAGCTAAGCATCATTCCTCAAGAACCAACACTTTTCAAGGGCAGCATTAGAACAAACTTGGACCCTTTAGGTCTCTACACTGATCATGAAATATGGAAGGCTCTAGAGAAATGTCAGCTGAAGGAAACAATTAGTTGTCTACCAAATCTCTTGGACTCTTATGTAAGTGATGAAGGTGAAAACTGGAGTGTAGGGCAGCGCCAACTGTTTTGTCTAGGAAGAGTGCTTCTTAAGAGGAACAGAATTCTTGTGCTGGATGAAGCTACTGCCTCCATTGATTCCACCACCGACGCCATTTTACAACGAGTTATCAGAGAAGAATTCTCAGAATGCACAGTTATAACGGTGGCACACAGAGTTCCAACTGTAATAGATAGTGACATGGTCATGGTCCTGTCTTATGGGAAACTGATTGAATATGATGAGCCTTCAAAGCTTATGGAGAGAGATTCTTCATTCTATAAGCTAGTGTCAGAATATTGGTCCAACTGTAATAGGAATATTCTCCAAAAAGACTAG 522 0.408 MKLSIIPQEPTLFKGSIRTNLDPLGLYTDHEIWKALEKCQLKETISCLPNLLDSYVSDEGENWSVGQRQLFCLGRVLLKRNRILVLDEATASIDSTTDAILQRVIREEFSECTVITVAHRVPTVIDSDMVMVLSYGKLIEYDEPSKLMERDSSFYKLVSEYWSNCNRNILQKD* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0223 173 Gene3D - 1 170 IPR027417 -
Amo09g0223 173 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 1 162 - -
Amo09g0223 173 Pfam ABC transporter 2 91 IPR003439 GO:0005524
Amo09g0223 173 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 162 - -
Amo09g0223 173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 159 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0223 Amo-Chr9 2516334 2517438 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0223 2 158 Calmodulin-binding Proteins AT2G36910 30.625 1.09e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0223 - - vvi:100241282 302.367