Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0215 ATGGAATGGTTGACTCTAAGGATTGAAACACTTCAAAATTTGACAGTCTTCACTGCAGCCTTGTTACTTATTCTAGTTCCTATGGATTATGTGTTCCCAGGGCTTTTGGGACTTTCACTTTCTTATGCATTCACATTGACACAAGCACAAATATTTTGGACAAGATGGTTTTGCAACTTATCAAACTATGTTATCTCTTTGAAAGAATCAAACAATTCATTCACATACCATCAGCTGAGCCTCCTGCTATTGTGGAATGAACTTATTCACTTTCTTCAATCCTTAGAGATTAGATATCGTCGGAATGCACCAATAGTCCTGAAAGGAATCACTTGCACATTCAAAGAAGGGAGTAGAGTGGGAGTTGTAGTAAGGACAGGAAGTGGAAAAACAACACTTATAAGTGCTCTGTTTCAATTGGTTCAGCCTTCAAGAGGTAGCATTATTATTGATGAGATTGACATATGCTCATTGGGGTTGAAGGATTTGAGAATGAAGCTTAGTATTATCCCTCAAGAAGCAACCTTTTTTCAGGGATAG 540 0.3778 MEWLTLRIETLQNLTVFTAALLLILVPMDYVFPGLLGLSLSYAFTLTQAQIFWTRWFCNLSNYVISLKESNNSFTYHQLSLLLLWNELIHFLQSLEIRYRRNAPIVLKGITCTFKEGSRVGVVVRTGSGKTTLISALFQLVQPSRGSIIIDEIDICSLGLKDLRMKLSIIPQEATFFQG* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0215 179 Gene3D - 88 179 IPR027417 -
Amo09g0215 179 PANTHER BNAA01G25250D PROTEIN 1 179 - -
Amo09g0215 179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 178 IPR027417 -
Amo09g0215 179 Pfam ABC transporter 107 178 IPR003439 GO:0005524
Amo09g0215 179 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0215 Amo-Chr9 2381614 2382399 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0215 92 177 Calmodulin-binding Proteins AT2G36910 28.736 7.68e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0215 - - ahf:112708773 256.914