Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0214 ATGTATCAAATTTCTTGGATCCAAAGTGGGACAGTTAGAGATAACATACTCTTTGGCAAGCCAATAGACAAGAAAATATATCAGAATACCATTAAGGCCTGTGCCTTGGATAAGGACATCAATGATTTAAGCCATGGGGATCTGACAGAAATCGGTCAGAGAGGGATCAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTAGAGCAGTTGTAGTTGAGATGCCAAAAGTGACTATGCCTTTTTTTGCGTATCTGAGGTCTTTGGTATCTGGACTTCTTGGATTAAAAGCTTCATCAGCCTTCTTCTCTAGTTTCAATAAGGCTATCTTCAATGAACTAGGAAGGATTTTAATCCGAGCTTCATCAGCTTTGAGTATTCTGGACCTTGATATACCTTATTCCATCACTTTTGCAGCATCTGTAGCTATTGAAATTGTCGTGATAATTGCTATAATGGCTTCAATCACATGGCAAGTTCTAATAGTTGCAATTCCTGCTACGCTAGCATCAAAATACGTTCAGGGATATTATCAAGCCTCTACAAGAGAAATAATAAGGATCAATGGAACAACCAAAGCACCAATGATGAATTTTGCAGTTGAGACATCACTTAGAGTGGTTACTGTTAGAGCATTCAACATGGTGGATGGATTTGTCAAGAACTACCTAAAACTTGTGGACACAGATGCATTCTAA 702 0.386 MYQISWIQSGTVRDNILFGKPIDKKIYQNTIKACALDKDINDLSHGDLTEIGQRGINMSGGQKQRIQLARAVVVEMPKVTMPFFAYLRSLVSGLLGLKASSAFFSSFNKAIFNELGRILIRASSALSILDLDIPYSITFAASVAIEIVVIIAIMASITWQVLIVAIPATLASKYVQGYYQASTREIIRINGTTKAPMMNFAVETSLRVVTVRAFNMVDGFVKNYLKLVDTDAF* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0214 233 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 78 232 - -
Amo09g0214 233 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 113 229 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo09g0214 233 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 3 74 - -
Amo09g0214 233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 75 IPR027417 -
Amo09g0214 233 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 3 74 - -
Amo09g0214 233 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 78 232 - -
Amo09g0214 233 Gene3D - 1 76 IPR027417 -
Amo09g0214 233 SUPERFAMILY ABC transporter transmembrane region 80 229 IPR036640 GO:0005524|GO:0016021
Amo09g0214 233 Gene3D ABC transporter type 1, transmembrane domain 77 232 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0214 Amo-Chr9 2378771 2381606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0214 11 73 Calmodulin-binding Proteins AT2G36910 43.077 8.13e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0214 - - csat:109125179 246.514