Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0211 ATGAGTCGAGAGCAACAGAAGGGGATAGGGAAGCAAGTCAAAGGCTCCGATGGTGCTGAGAAGGTTATCGTTGCCGTTAAGGCTTCGAAAGAAATTCCGAGGACTGCACTTGTTTGGTCCCTCACTCATGTTGTTCAACCTGGAGATTGCATCACCCTGCTAGTGGTTGTGCCTTCTCAAAGTTCAGGCAGAAGATTATGGGGTTTTCCTAGATTTGCTGGTGATTGTGCCAGTATCAGTAAAAAGTATCCTCCAGGAACAGTTTCAGAGCAGAAGCATGATATCACTGATTCTTGTTCTCAAATGATCCTTCAGCTCCATGACGTGTATGATCCGAATAAGATAAATGTCAGGATTAAAATTGTTTCTGGATCTCCTTGTGGAGCAGTGGCCGCAGAAGCCAAGAAAGCGCAAGCCAATTGGGTTGTATTAGACAAACAGCTCAAACATGAAGAAAAGCGATGCATGGAAGAGCTACAGTGTAATATTGTGGTCATGAAGCGTTCCCAACCAAAAGTACTCCGCTTGAATTTGATTGGATCGCAAAAGGAAGCTGAAGAATCATGTCCATTGCCTTCTGAGCATGATGAGCTGGCTGAAAATCAAACCAAAAAGAATACTGATTCACTAAATTCCATTAAGGGGCCTTCTGTAACTCCAACTAGCAGCCCGGAGCAAGGGACTCCATTTACTGCAACGGAAGCTGGAACTTCATCAGTTTCAAGCTCTGATCCAGGAACTTCACCATTCTTTATCTCAGAGACAAATGGTGAGTTGAAGAAAGAGGAGACTATCAAAGAAAATCAAGAACTTGATGATTCAGACACAGAAAGTGAAAGTTTGTCCACATCTTCGGCAAGCTTGAGATTCCAGCCATGGATCACAGAATTACTTTTACATCAACAATCATCTCAACGAAACGAAGAAAGGCCAGAAATTTCTCAAGATATGCCTCAAACATCTACAACTAGAGCCTTGCTAGAAAAGTTCTCAAGGCTCGATCGAGGAGCTGGAATTGAAATATCAAATTATAGAAATGAGTCAGATTTTAGTGGAAATCTCAGAGAGGCAATATCATTATCTAGAAATACTCCGCCTGGTCCACCTCCATTATGTTCGATATGTCAACACAAGGCACCTGTTTTCGGAAAACCTCCAAGATGGTTCAGCTATGCCGAGTTAGAACTTGCCACTGGTGGATTTTCTGAGGCCAACTTCCTGGCTGAGGGGGGATTTGGATCCGTTCACAGAGGGGTTCTACCGGATGGACAAGTCGTTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGACCTTGAGTTTTGCTCAGAGGTAGAAGTCCTGAGTTGTGCTCAGCACCGAAATGTTGTTATGCTGATTGGATTCTGCATAGAGGATAAGAGAAGGCTACTAGTTTACGAGTACATATGCAATGGATCATTGGATTCACATTTATATGGGAGACAGCGAGAACCATTAGAATGGGCTGCACGGCAAAAAATTGCCATTGGAGCTGCTCGTGGGTTACGATATCTTCATGAAGAGTGCAGAGTGGGATGCATTATCCACCGTGACATGCGGCCTAACAACATTCTCATAACTCATGATTTTGAACCACTGGTTGGTGATTTTGGATTGGCGAGGTGGCAACCTGATGGAGACACGGGTGTGGAAACCCGAGTAATTGGAACATTCGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACTGAAAAAGCTGATGTTTATTCATTCGGGGTGGTATTGGTGGAGCTTGTTACAGGGAGAAAAGCTGTGGATCTCACGCGGCCTAAGGGACAGCAGTGTCTTACTGAGTGGGCACGACCTCTGTTGGAAGAATATGCCATTGAGGAACTGATTGATCCAAGGCTGGGGAACCAATACTTAGAAAATGAGGTCTATTGCATGTTGCATGCTGCATCATTATGCATACGGCGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTTCGTATACTGGACGGCGACATGGTCATGGACACGAGTTACATTTCAACTCCAAGTTATGATGTGGGAAACCGGAGTGGCCGACTCTGGTCGGAGCCGCTGCAGAGGCAGCACCATTACAGCGGTCCTCTGTTAGAAGAGTCACTTGAATCATTCAGTGGGAAGCTATCTCTTGACAAATACAGGCCTGCATATTGGGATAGGGACAACAAAGCAAGAAGGACTTCATGTGAAGATAACATTTAA 2247 0.4473 MSREQQKGIGKQVKGSDGAEKVIVAVKASKEIPRTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASISKKYPPGTVSEQKHDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLIGSQKEAEESCPLPSEHDELAENQTKKNTDSLNSIKGPSVTPTSSPEQGTPFTATEAGTSSVSSSDPGTSPFFISETNGELKKEETIKENQELDDSDTESESLSTSSASLRFQPWITELLLHQQSSQRNEERPEISQDMPQTSTTRALLEKFSRLDRGAGIEISNYRNESDFSGNLREAISLSRNTPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSEANFLAEGGFGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQREPLEWAARQKIAIGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIEELIDPRLGNQYLENEVYCMLHAASLCIRRDPHSRPRMSQVLRILDGDMVMDTSYISTPSYDVGNRSGRLWSEPLQRQHHYSGPLLEESLESFSGKLSLDKYRPAYWDRDNKARRTSCEDNI* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0211 748 MobiDBLite consensus disorder prediction 204 254 - -
Amo09g0211 748 ProSitePatterns Tyrosine protein kinases specific active-site signature. 522 534 IPR008266 GO:0004672|GO:0006468
Amo09g0211 748 CDD USP_Like 21 144 - -
Amo09g0211 748 MobiDBLite consensus disorder prediction 202 286 - -
Amo09g0211 748 PANTHER OS01G0253100 PROTEIN 17 706 IPR045271 GO:0004714|GO:0006468
Amo09g0211 748 Gene3D Transferase(Phosphotransferase) domain 1 477 683 - -
Amo09g0211 748 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 17 706 - -
Amo09g0211 748 CDD STKc_IRAK 407 673 - -
Amo09g0211 748 ProSiteProfiles Protein kinase domain profile. 401 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0211 748 MobiDBLite consensus disorder prediction 301 322 - -
Amo09g0211 748 Pfam Protein tyrosine and serine/threonine kinase 406 670 IPR001245 GO:0004672|GO:0006468
Amo09g0211 748 SUPERFAMILY Protein kinase-like (PK-like) 385 683 IPR011009 -
Amo09g0211 748 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0211 Amo-Chr9 2303795 2310070 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0211 381 675 Trihelix Transcription Factor Family AT1G70460 54.967 9.84e-104 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Amo09g0211 PK_Tyr_Ser-Thr 2.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0211 - - gmx:100816340 1324.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo09g0211 09 2303795 2310070 Amo09g0211 09 2303795 2310070 PCT