Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0200 CAGATTGCCTTTCAATTATTAGTGAAGGCATTGATTAATTTGGATCCAAGTGAAGAGATGGAGCTTATAAGGAAATATTTTCAAGAATTCATCTCTGGCATTATGTCTTTACCCATAAACCTACCAGGAACTCAACTTCATCAATCTTTACAAGCAAAAAAGAAAATGGTGAAATTAGTGCTAAGAATAATCCAAGAAAGAAGAAACGGTGGCATCACCAAAGTTCCAAAGGATGTATTAGATGTGCTTCTTAATGATTCAATTGAGGAATTAACAGATGATTTGATAGCACATAACATTATAGATATGATGATTCCTGGAGAGGACTCAGTGCCACTTCTTATCACATTAGCTATCAAGTATTTATCTGAATATCCTGCTGCTTTGCAACAATTAACGGAGGAAAATATGAAGCTTAAGAAACAGAAATATCATCTTGGGGAGACCTTGTGTTGGAGCGATTACTTATCATTATTGCCATTTACTCAATTGGTTATCACAGAAACTTTGAGAATGGGAAATATTATAATTGGTGCTATGAGAAAGGCAACAAAAGATGTTAAAATAAAAGGGTACTTAATACCAAAAGGGTGGTGTGTTCTTGCAAATTTTAGATCACTTTTAAATGATACATTGAAGAAATTTCAGGACAAAGAGTTAAACAATTGTAATTTCACACCTTTTGGAGGTGGACAAAGACTCTGTCCTGGACTTGAATTAGCTAGGCTTGAAGCTTTTATATTTCTACACCACTTTGTTACTCAGTTCAGATGGTATGCTGAAGAAGATACAATAGTGAACTTCCCCACTGTAAGAATGAAAAGGAAGATGCCTATCTTTGTGAAGAGAGTAGAATCTTGA 861 0.3449 QIAFQLLVKALINLDPSEEMELIRKYFQEFISGIMSLPINLPGTQLHQSLQAKKKMVKLVLRIIQERRNGGITKVPKDVLDVLLNDSIEELTDDLIAHNIIDMMIPGEDSVPLLITLAIKYLSEYPAALQQLTEENMKLKKQKYHLGETLCWSDYLSLLPFTQLVITETLRMGNIIIGAMRKATKDVKIKGYLIPKGWCVLANFRSLLNDTLKKFQDKELNNCNFTPFGGGQRLCPGLELARLEAFIFLHHFVTQFRWYAEEDTIVNFPTVRMKRKMPIFVKRVES* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0200 286 Pfam Cytochrome P450 19 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g0200 286 SUPERFAMILY Cytochrome P450 16 282 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g0200 286 Coils Coil 122 142 - -
Amo09g0200 286 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 228 237 IPR017972 GO:0005506|GO:0016705
Amo09g0200 286 PRINTS E-class P450 group I signature 95 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g0200 286 PRINTS E-class P450 group I signature 115 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g0200 286 PRINTS E-class P450 group I signature 235 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g0200 286 PRINTS E-class P450 group I signature 225 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g0200 286 PANTHER CYTOCHROME P450 26 1 279 - -
Amo09g0200 286 Gene3D Cytochrome P450 1 284 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g0200 286 PRINTS P450 superfamily signature 106 123 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g0200 286 PRINTS P450 superfamily signature 235 246 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g0200 286 PRINTS P450 superfamily signature 226 235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g0200 286 PRINTS P450 superfamily signature 164 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g0200 286 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0200 Amo-Chr9 2147009 2150091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0200 2 257 Cytochrome P450 AT3G13730 61.255 4.65e-111 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0200 K12638 - gmx:100797868 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0494 19 7259893 7264473 Amo09g0200 09 2147009 2150091 hybridization