Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo09g0193 | ATGGTGAGCAGCATAACAACATTACTTCTTTGGTTCTTTCTTACATCCCACATGATAACTGTCACATCAACAGACAGTTTAGCAATGAGTCAATGTATTCGAGATGGCGAAACGTTAATCTCGGCCGGCCGAAATTTTGAGCTGGGTTTCTTTAGCCCCGGAATTTCAACAAGTCGATATTTGGGTGTGTGGTACAGAGCTTCATCAGGGAATGCAACAATTGTGTGGGTGGCAAACAGAGAAAACCCCCTTCACAACAAGTTAGGAACTTTAAGGTTAAACAACAAGGGGATTCTTGAGCTTCTTAGTAACACAAATAAAACCATTTGGTCATCCAACATCATAGCAAGCAAAACCAAAGCCACGAGTAGCTCAATTGTACAACTCTTGGATACAGGAAATCTTGTAGTGAAAAATGGACAAGATACTAATAATGAGGACAATCCTTTGTGGCAAAGTTTTGATTATCCTGGCGACACATTGATGCCAGGAATGAAGGTTGGATTGAACTTTGTTACTGGGAAGAATGCATCTCAATCATGCTGGAAAAGCGACGAGGATCCTGCTGTGGGAGAATATTCTCTAAAATTTGATCCTAGAGGATATCCACAATTGATGCAGATGAAAAGATCTGCAATAAGTATCAGACGAGGGTCATGGAATGGCCGTTATTTTACTGGATCTCCAGCTGAGGACATGCATGAATTTAAAACTGATTTTGTGTTCAACAAAGAAGAGGTCTATTATGAGTTTGAAATTCTTGATAGATCAATCTTCTCTGTATTCAAAATGGACCCTTCTGGGAATACACAAATTATGGTTTGGGAAATTCAAACAAGAATTCCAGTGGAAGTTTCCATGATCAATGGACCAAATGCATGTAAAAGTTATGCATTTTGTGGTCAAAATTCTTGGTGCTTTATGGATGGCAATTTTGCTGTATGCCAATGCATGAAAGGTTATACTCCCAAGTTTCCTGAACAATGGAATACATCACAGTGGTCTGGTGGTTGTGTTAGAAAGACTCCATTGAAGTGTAATGATACAAATGGATTCTTCATGTATGAGTACATGAAAATGCCGGACACATCTTCTTCATGGTTTAGCGAGACCATGAACCTCGAGGAATGTGGAAAATCATGCCTGGAAAATTGTTCATGTGTTGCATATGCAAGTTTGGATATCCGAAATGGAGGAACTGGTTGTCTACTTTGGTTTGATTATCTTGTTGATGTGATGCAATTTTTTAAGGCCGGTCAAGATCTTTATATTAAAGTCCCTGCATCAGAATTAGATATTTACCATGGACACAACAAGAAAATTAAAGTGGGAATTGCAGCTGGTGTCATTGTCTTCGGATTAATCACAATTGTCAGCATAATGATAATTACAAAACCAGGGGCAACAAGGATATTATGCAGAAGGTGGCAACGACGAGAAAACATTGATCTACCAACATTTGATTTCTCAATCCTAGCTAAAGCTACAGAAAACTTTTCAAGTTGCAACAAACTTGGAGAGGGTGGTTTTGGACCAGTATACAAGGGCACATTGTCAGATGGTCAACATTTAGCTGTGAAAAGGCTTTCAAAAAAGTCTACACAAGGATTGGAGGAGTTTAAAAATGAAGTGGTATTGATAGCCAAACTTCAACATCGCAATCTTGTGAAACTTCTTGGTTGTTGCATTCAAGGAGCAGAAAAAATATTAATCTATGAATACATGCCTAACAAAAGCTTGGACTACTTTGTTTTTGATGAAATAAGGAGGAAGCTACTCAATTGGCATAAGCGTTTCGACATTATTAGTGGCATTGCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGACTAAGGATTATTCACAGAGATCTAAAAACCAGCAATATTTTATTAGATGCAAATATGAATCCAAAAATATCAGACTTTGGTCTAGCAAGAACATTCTTAGGAGACCAAGCAGAGGATAAGACAGACAGAGTAGTTGGAACATATGGCTATATGCCTCCGGAGTATGTAGTGCACGGACAATTCTCAATGAAGTCAGATGTTTTTAGCTATGGTGCGATTGTATTAGAGTTGATAAGTGGGAAGAAAAATAGACAGTTCTCAGATCCAGAACACAACCTTAATCTTCTTGGGCATGCTTGGAGATTATGGTCTAATGAGAGGCCATTGGAACTATTAGATGAAGTATTAAAGGAAGGATGCACCCGTTCTGAAGTCATACGATGCATACAAGTGGGTCTGTTATGTGTGCAGCAAAGACCAGCAGATAGACCAAACATGTCATCAGTGGTTCTAATGCTAAATGGTGAGAAATTGTTGCCCAAGCCAAAAGTTCCCGGTTTTTATAATGACAGAAGTGTTACACTTGAAACAGATTCTTTGTTGAAAAATTACACATCATTTTCAACCAATGAAATTTCTAACACTATGATGCTGCTTATTTCATTACTTCTCATGTCCTGCATGAGAACAATCACTTCAAGAGACAGTTTAGAAGTAGGTCAATCTATCCAAGATGGTGAGACTTTGGTTTCTTCTGGTGGAAGCTTTGAATTGGGTTTCTTTAGTCCTGGCATTCCAACAAATAGATACTTAGGTGTGTGGTACAGAGATGCGTCAGGGAATTCAACAGTTGTGTGGGTGGCAAACAGAGAGATACCAATTCAAAGTAACTCATCAGGTGTTTTGAGACTAAGCAAGAAGGGGATTCTACAGCTTCTGAATGGCACTAACAGCACCATTTGGTCTTCCAACACCTCAGGCAACACTTTGGGGAGCTCAATTGCACAACTCTTGGATTCGGGAAATCTTGTAGTGAAAAATGGACAAAGCACATCGGAGAAAAACTTTTTATGGCAAAGTTTTGATTATCCATGTGATACACTGATGCCAGGAATGAAGCTTGGATTGAACTTAGTTACTGGTTTTGACATATCTATGTCATCTTGGAAAAGTGCAGAGGATCCTGCTGTAGGAGAATATTCTATAAAGTTTGATCCTAGAGGATATCCACAATTAATACAATGGAAAGGATCTGTTAAATATTTCCGAACAGGGACATTTAATGGCCTTTATTTCACTGGATATCCAACCCAGGAAGATGAATATAGACAGGATTTTGTATTGGACAAAACCGAGGTGTGTTGGAAGTTTGAAATACTAGACAGATCAATTTTCTACCTGTATAAACTACAACCTTCAGTTACTTCAATAGGTACTATTTGGAAAAATCAAACAAGAACTGAGTTGGAACTTGCCACAATTGATGGATACAATGGGTGTGGAAGTTATGCCTTTTGCGGTTCAAATGCTATATGCAAGGTTGATGCTAACCTTGCATCATGTGAATGCCTAAAAGGATATGTTCCCAAGTTTCCCCAACAATGGAATATGTCAAATTGGTCTGATGGTTGTGTTAGGAAGACTTCACTGGATTGTAATAACACTAATAGCTTCTTAAGGTACACAGATATAAAAGTGCCAGACACTTCATCCTCATGGTATAACAAGACCATGAATCTCAAGGAATGTGAAAACATTTGCCTAAAAAACTGTTCTTGTGTTGCTTATGCAAATTTGGATATCCGTAATGGAGGAAGTGGTTGCCTACTTTGGTTTAATCATCTTATTGACATGGTTCAATACTCAAGAGCTGGTCAAGATATTTATATCAAAGTCCCTACTTCGGAATTAGGTAATGACCACGGAAATTTGAAGAAAAAGAAGGTGCGAATTGCAGTTGGTGTGATTATTTTCGGATTAATCACTTGTGTTAGCATAGAAAAAAGTGCAAAGTTGTGTTTATCATGTTCTTATTCACTGTGGTTTTCCAATCAATTAGGAGTTGCAAGAATAATTCAAAGAAATAGGCAAAGACAGGTCACTGAGCTACCAACATTTGATTTCTCGGTCTTAGTTAAAGCAACAGAGAACTTTTCAAGTAGTAACAAACTTGGAGAAGGTGGTTTTGGATCAGTATACAAGGGCACACTAACAAATGGTCAAGAGTTAGCTGTGAAAAGGCTTTCAAAAAAGTCTAAACAAGGTTTAGAAGAGTTTAAAAATGAAGTGGCATTGATAGCCAAACTTCAACATCGTAATCTTGTAAAGCTTCTTGGATGTTGCATTCAAGGAGTAGAAAAAATATTGATTTATGAATACATGCCAAACAAAAGCTTAGACTACTTTGTTTTTGATGAAATCAGAAAGAAGATGCTAGATTGGCTTAAGCGTTTCAACATTATCAGTGGCATTGCTCGGGGACTTCTTTATCTTCATCAAGATTCTAGACTGAGGATTATTCATAGAGACCTAAAAACTAGCAATATTCTGTTAGATGCAAATTTGAATCCTAAAATATCAGACTTTGGCCTAGCTCGGACATTCTTAGGCGATCAGCTCGAGGCTAACACGAACAGGGTAGCTGGAACATATGGTTATATGCCTCCCGAGTATGCAGTACATGGACAATATTCAATGAAGTCCGATGTTTTTAGCTATGGTGTCATACTACTAGAGTTGATAAGTGGGAAGAAGAATAGAGAATTTTCAGATCCAGAAAACTACCTTAACCTTCTTGGACATGCATGGAGATTATGGACTGATGAGAAGCCATTGGAACTGCTAGATGAAGTGTTAAAGGAAGGATGCACACCACTTGAAGTAAAAAGATGCATTCAAGTGGGCCTCTTATGTGTGCAACAAAGACCAGAAGATAGGCCAGACATGTCTTCAGTGGTTCTAATGTTGAATGGTGAGAAATTACTGCCCAAGCCAAAGGTTCCTGGTTTTTATACTGAAAGAGGTGTTACACTTGAAGCAGATTCTTTGATGGAAAATCACACATTGTTTTCAGCCAATGAAATCTCCATCACAACATTATATGCAAGATAG | 4902 | 0.3809 | MVSSITTLLLWFFLTSHMITVTSTDSLAMSQCIRDGETLISAGRNFELGFFSPGISTSRYLGVWYRASSGNATIVWVANRENPLHNKLGTLRLNNKGILELLSNTNKTIWSSNIIASKTKATSSSIVQLLDTGNLVVKNGQDTNNEDNPLWQSFDYPGDTLMPGMKVGLNFVTGKNASQSCWKSDEDPAVGEYSLKFDPRGYPQLMQMKRSAISIRRGSWNGRYFTGSPAEDMHEFKTDFVFNKEEVYYEFEILDRSIFSVFKMDPSGNTQIMVWEIQTRIPVEVSMINGPNACKSYAFCGQNSWCFMDGNFAVCQCMKGYTPKFPEQWNTSQWSGGCVRKTPLKCNDTNGFFMYEYMKMPDTSSSWFSETMNLEECGKSCLENCSCVAYASLDIRNGGTGCLLWFDYLVDVMQFFKAGQDLYIKVPASELDIYHGHNKKIKVGIAAGVIVFGLITIVSIMIITKPGATRILCRRWQRRENIDLPTFDFSILAKATENFSSCNKLGEGGFGPVYKGTLSDGQHLAVKRLSKKSTQGLEEFKNEVVLIAKLQHRNLVKLLGCCIQGAEKILIYEYMPNKSLDYFVFDEIRRKLLNWHKRFDIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANMNPKISDFGLARTFLGDQAEDKTDRVVGTYGYMPPEYVVHGQFSMKSDVFSYGAIVLELISGKKNRQFSDPEHNLNLLGHAWRLWSNERPLELLDEVLKEGCTRSEVIRCIQVGLLCVQQRPADRPNMSSVVLMLNGEKLLPKPKVPGFYNDRSVTLETDSLLKNYTSFSTNEISNTMMLLISLLLMSCMRTITSRDSLEVGQSIQDGETLVSSGGSFELGFFSPGIPTNRYLGVWYRDASGNSTVVWVANREIPIQSNSSGVLRLSKKGILQLLNGTNSTIWSSNTSGNTLGSSIAQLLDSGNLVVKNGQSTSEKNFLWQSFDYPCDTLMPGMKLGLNLVTGFDISMSSWKSAEDPAVGEYSIKFDPRGYPQLIQWKGSVKYFRTGTFNGLYFTGYPTQEDEYRQDFVLDKTEVCWKFEILDRSIFYLYKLQPSVTSIGTIWKNQTRTELELATIDGYNGCGSYAFCGSNAICKVDANLASCECLKGYVPKFPQQWNMSNWSDGCVRKTSLDCNNTNSFLRYTDIKVPDTSSSWYNKTMNLKECENICLKNCSCVAYANLDIRNGGSGCLLWFNHLIDMVQYSRAGQDIYIKVPTSELGNDHGNLKKKKVRIAVGVIIFGLITCVSIEKSAKLCLSCSYSLWFSNQLGVARIIQRNRQRQVTELPTFDFSVLVKATENFSSSNKLGEGGFGSVYKGTLTNGQELAVKRLSKKSKQGLEEFKNEVALIAKLQHRNLVKLLGCCIQGVEKILIYEYMPNKSLDYFVFDEIRKKMLDWLKRFNIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLNPKISDFGLARTFLGDQLEANTNRVAGTYGYMPPEYAVHGQYSMKSDVFSYGVILLELISGKKNREFSDPENYLNLLGHAWRLWTDEKPLELLDEVLKEGCTPLEVKRCIQVGLLCVQQRPEDRPDMSSVVLMLNGEKLLPKPKVPGFYTERGVTLEADSLMENHTLFSANEISITTLYAR* | 1634 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo09g0193 | 1633 | CDD | STKc_IRAK | 505 | 772 | - | - | |
| Amo09g0193 | 1633 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1436 | 1448 | IPR008271 | GO:0004672|GO:0006468 | |
| Amo09g0193 | 1633 | Pfam | D-mannose binding lectin | 73 | 183 | IPR001480 | - | |
| Amo09g0193 | 1633 | Pfam | D-mannose binding lectin | 880 | 987 | IPR001480 | - | |
| Amo09g0193 | 1633 | Pfam | Protein tyrosine and serine/threonine kinase | 1318 | 1584 | IPR001245 | GO:0004672|GO:0006468 | |
| Amo09g0193 | 1633 | Pfam | Protein tyrosine and serine/threonine kinase | 502 | 768 | IPR001245 | GO:0004672|GO:0006468 | |
| Amo09g0193 | 1633 | Pfam | S-locus glycoprotein domain | 1019 | 1128 | IPR000858 | GO:0048544 | |
| Amo09g0193 | 1633 | Pfam | S-locus glycoprotein domain | 216 | 325 | IPR000858 | GO:0048544 | |
| Amo09g0193 | 1633 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 827 | 1630 | - | - | |
| Amo09g0193 | 1633 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1321 | 1343 | IPR017441 | GO:0005524 | |
| Amo09g0193 | 1633 | ProSiteProfiles | Protein kinase domain profile. | 1315 | 1592 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Amo09g0193 | 1633 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 74 | 188 | IPR036426 | - | |
| Amo09g0193 | 1633 | SMART | serkin_6 | 1315 | 1586 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Amo09g0193 | 1633 | SMART | serkin_6 | 499 | 751 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Amo09g0193 | 1633 | Gene3D | - | 826 | 958 | IPR036426 | - | |
| Amo09g0193 | 1633 | Gene3D | - | 18 | 154 | IPR036426 | - | |
| Amo09g0193 | 1633 | CDD | PAN_AP_plant | 1145 | 1230 | - | - | |
| Amo09g0193 | 1633 | ProSiteProfiles | PAN/Apple domain profile. | 346 | 428 | IPR003609 | - | |
| Amo09g0193 | 1633 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 880 | 1026 | IPR036426 | - | |
| Amo09g0193 | 1633 | CDD | STKc_IRAK | 1321 | 1588 | - | - | |
| Amo09g0193 | 1633 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 620 | 632 | IPR008271 | GO:0004672|GO:0006468 | |
| Amo09g0193 | 1633 | SMART | blect_4 | 837 | 961 | IPR001480 | - | |
| Amo09g0193 | 1633 | SMART | blect_4 | 30 | 157 | IPR001480 | - | |
| Amo09g0193 | 1633 | SUPERFAMILY | Protein kinase-like (PK-like) | 1297 | 1586 | IPR011009 | - | |
| Amo09g0193 | 1633 | Gene3D | Transferase(Phosphotransferase) domain 1 | 575 | 777 | - | - | |
| Amo09g0193 | 1633 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1391 | 1592 | - | - | |
| Amo09g0193 | 1633 | Pfam | PAN-like domain | 1149 | 1215 | IPR003609 | - | |
| Amo09g0193 | 1633 | Pfam | PAN-like domain | 346 | 412 | IPR003609 | - | |
| Amo09g0193 | 1633 | ProSiteProfiles | Protein kinase domain profile. | 499 | 776 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Amo09g0193 | 1633 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 19 | 814 | - | - | |
| Amo09g0193 | 1633 | CDD | B_lectin | 838 | 961 | IPR001480 | - | |
| Amo09g0193 | 1633 | Gene3D | Hepatocyte Growth Factor | 343 | 423 | - | - | |
| Amo09g0193 | 1633 | Gene3D | Hepatocyte Growth Factor | 1146 | 1227 | - | - | |
| Amo09g0193 | 1633 | SMART | ntp_6 | 1150 | 1229 | IPR003609 | - | |
| Amo09g0193 | 1633 | SMART | ntp_6 | 347 | 426 | IPR003609 | - | |
| Amo09g0193 | 1633 | PANTHER | SERINE/THREONINE KINASE FAMILY PROTEIN | 827 | 1630 | - | - | |
| Amo09g0193 | 1633 | ProSiteProfiles | Bulb-type lectin domain profile. | 24 | 150 | IPR001480 | - | |
| Amo09g0193 | 1633 | PANTHER | SERINE/THREONINE KINASE FAMILY PROTEIN | 19 | 814 | - | - | |
| Amo09g0193 | 1633 | Gene3D | Phosphorylase Kinase; domain 1 | 471 | 574 | - | - | |
| Amo09g0193 | 1633 | Gene3D | Phosphorylase Kinase; domain 1 | 1282 | 1390 | - | - | |
| Amo09g0193 | 1633 | SUPERFAMILY | Protein kinase-like (PK-like) | 484 | 785 | IPR011009 | - | |
| Amo09g0193 | 1633 | CDD | B_lectin | 33 | 157 | IPR001480 | - | |
| Amo09g0193 | 1633 | ProSiteProfiles | PAN/Apple domain profile. | 1149 | 1231 | IPR003609 | - | |
| Amo09g0193 | 1633 | ProSiteProfiles | Bulb-type lectin domain profile. | 831 | 955 | IPR001480 | - | |
| Amo09g0193 | 1633 | CDD | PAN_AP_plant | 342 | 427 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo09g0193 | Amo-Chr9 | 2022333 | 2030923 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo09g0193 | 487 | 785 | Receptor kinase-like Gene Family | AT4G23140 | 59.477 | 4.99e-122 | 397 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | RLK-Pelle_DLSV | Amo09g0193 | PK_Tyr_Ser-Thr | 2.3e-47 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo09g0193 | - | - | aip:107614885 | 3147.45 |