Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0190 ATGATGAACAACTACTCAAGAATGTTGCTACTCATTTGGTTTTCTCTCATATCTTGCTTTAAAACCACCACTTCAAAAGATAGCTTAAGAATGAGTGAGTATATTCGAGATGGCGAGACTTTAGTCTCGGCAGGTGGAAGCTTTGAAGTGGGTTTCTTCAGCCCCGGAGCTTCGACTCGCCGGTACTTGGGCTTGTGGTATAGAGATGCATCAAGAAACAACACAATTTTGTGGGTGGCCAATAGAGAAAGACCCCTTCACAATAAGTCAGGTGTTTTGATATTCAAAGAAACAGGGGATCTTCAACTTCTTAGTGACACAAACAACACCATTTGGTCATCCAACATCTCAAGCAAAGCCTTGAGTAACTCGGTTGCACAGCTCTTGGATTCAGGGAATCTTGTGGTGAAAAATGTACCAGATACTAAGGAGGGAAGCTTTTTGTGGCAGAGTTTTGATTATCCATGCGATACATATATTCCAGGGATGAAATTCGGCCGGGACTTAGCTACCGGCCTAGACAGATCGCTTTCGTGCTGGAAAAGTACAGAGGATCCTGCTGTAGGAGAATATTCTCTAAGAGTTGATCCTAGGGGATATCCACAGGTAATGCAAATGAAGGGTTCTGTTATAATTAGTAGAATAGGATCATGGAATGGCATTTATTTTACTGGAACTCCAGTTGAAGGCATGAGCATACTTAAGCGTAATTTCGTGTTGAATTCGAAAGAAGTGTATTTTGAGTTTGAAATACTTGATAGGTCCATCTTCTCCATACTCAAAACAAACCCTTCTGGAGATGCACAAGTTATGACTTGGACAAGTCAAACAACGAGCCGGGTTGAAGTTTCCCTAACCGGCGGGCAGTATGCCTGTGGAAGTTATGCCTTGTGTGGTTCAAATTCCGTATGTAGCATGGCTGCTGATGTTGCAACATGCGATTGCGTAAAAGGATACACTCCAAAGTTTCCTGAAAAATGGTACATCTCAGATTGGTCTAGTGGGTGTTCTAGAAAAGATGCATTGGATTGTGATGATGTAGTAGGGTTCTTGAAGTACAGTGACATGAAATTGCCAGACACATCTTCCTCATGGTATAGTGAGACAATGAACCTTGAAGAATGTCAGAAGTTATGTCTCAAAAATTGTTCTTGTACAGCATATGCAAATTTGGATATCCGCAATGGAGGAAGTGGTTGCCTACTTTGGTTTGGTAATCTTACTGACATGATGCAATTCTCAAAAGGGGGTCAAGACCTTTACATCAAAGTCCCTGCTTCAGAATTAGGTAATAGCCATGGAAATACGAATAAAAAGAAGATAGGAATTGCAGTTGGTGTGAGCATTTTTGGATTAGCAACATCCATCGCCATAACAACAATAATTAGAAATCCAGCAAGAATACTTAACAGACATAAGCAAAGACAAGAAGATATCAACCTACCAAAATTTGATTTCTCACTCTTAGCCAAAGCTACTGAAAACTTCTCAAGCAATAATAAACTTGGAGAAGGTGGTTTTGGACCGGGTAAGATGATAGATGGCCAAGAGATAGCTGTGAAAAGACTTTCTAAAAAATCTGGACAAGGGTCGGAAGAGTTCAAGAATGAAGTGATGTTGATAGCTAAACTTCAGCATCGTAATCTCGTGAAGCTTCTTGGCTACTGCATTCAAGGGGAAGAAAAAATATTAATCTATGAGTATATGCCTAACAAAAGCTTGGACTACTTTGTTTTTGGTGAAGTCAGAAGAAAGTTGCTAGATTGGCCTAAACGTTTCAACATTATTAGTGGTATTGCTCGAGGACTTCTTTATCTTCATCGAGATTCTAGACTAAGGGTTATTCATAGAGATTTAAAAACTAGCAATATCCTACTAGATGTTGATTTGAATCCAAAAATATCAGACTTTGGGTTGGCTCGAACATTCTCATGTGATCAAGTCGAGGCTAACACTGATAGGGTGGCTGGAACATATGGTTATATGTCTCCTGAGTATGCAGTGCACGGACAATTCTCATTAAAATCTGATGTCTTTAGCTACGGTGTAATAGTACTAGAGTTGGTAAGTGGGCTAAAAAACAGGGAATTTTCAGACCCAGAAAACAATCTTAATCTTCTTGGACATGCATGGCAACTATGGACAGATGAGAGGCCACTAGAACTATTGGATGAAGAGTTAAAGGAAGGATGCATCCCTACCGAAGTCATACGGTGCATACAAGTGGGTCTGTTATGCGTGCAACAAAGACCAGAAAATAGACCAGACATGTCATCAGTGATTCTAATGTTAAATGTTATTTGGTTCTTTCTCGTGTCCTGCATGAGAACCACCACTTCATCAGACAGCCTAGGAATGGCACAATATATCCGAGACGGTGAATCTTTAGTCTCAGCTGGTGGAAGCTCTGAACTTGGTTTCTTCAGCCCTGGAACTTCGACAAGTCGATATTTGGGTGTGTGGTACAGAGATACATCAGGAAATCCAACAGTTGTGTGGGTAGCTAACAGAGAAAGACCCCTTCACAACAAGTCAGGAGTTTTGCAATTCAACAAAATGGGGATTCTTCAGCTTCTTGATGAGACAAACAACACTGTTTGGTCGTCCAACATATCCAGCAAATCCTGGAGTAACTCAATTGCACAGATTTTGGATTCGGGAAATCTTGTAGTGACAAATGGGAAAAATATTTATAACAGCAGCTTTTTGTGGCAGAGTTTTGATTACCCTTGTGATACATTGATGCCTGGAATGAAGATTGGATGGAACTTCGTTACTGGTCAGGAAAAATATGTATCAAGCTGGAAAAGTGAAGAAGATCCTGCTGTGGGAGAGTATACTATAAAAATTGATCCTAGAGGATATCCACAAATAATGGTAATGAAAGGATCTCTTATATCTTTCAGAGGTGGATCATGGAATGGCCTTTATTTTACTGGATCTCCATCTCAGAACACACAAACATTTAGATCCAATTTTGTATTGAATGGAAAAGAGGTGTATTATGAGTTTGAAATGCTTGATACTTCCATTTTCACAGTACTTAAAGAATACCCTTCTGGTAATGGACAATATCTGGTTTGGACAAGCCAAACAAGAAACAAGGTACAAGTTACCCAGGTTGCGAACCAAGGTGGGTGTGAAAGGTATGCCTATTGTGGTTCAAATGCTATATGCATTGTGGATAGTAATGTTGCAATATGCAAGTGTCTGAAAGGGTATATTCCCAATCCCAAGTTTCCTAAATCACAAAATATGTCATATTGGTCCAATGGTTGTGAGAGAAAGGTTGCACTGGATTGCAATAACACCAATGGCTTCTTGAGGTACACAGGCATAAAATTGCCAGACACATCTTCTTCATGGTATAGTGAGACAATGAACCTCCAGGAATGTCAAAAGTTTTGCCTGAAAAACTGTTCTTGTTCAGCATATTCAAGTTTGGATATTCGTAATGGAGGAAGTGGTTGTCTAATTTGGTTTCATAATCTTACTGACATTATACAATTCACACAAGGGGGTCAAGACCTTTACCTAAAAGTCCCTTCTTCAGAATTGGCTGCTAATGGCCATGGAAACATCAAGCAAAAGAAGGTAGGAATTGCAGTTGGTGTGATTATTTTCGGATTAATCACATGTGTCAGCATAATGATTATACATCCAGGGACAAGAAAAATAATTTACAGAGAAAAACAGATGCAAGAAGATATTGATCTACCAGCATTCAATTTCTCAGTCTTAGCTAAAGCTACCGAAAAATTTTCAAGCAGTAACAAACTTGGAGAAGGTGGTTTTGGAGAAGTATACAAGGGTACATTGACTGATGGGCAAGAGTTAGCCATAAAAAGACTCTCAAAAAAGTCTGGCCAAGGGTTGGAAGAGTTCAAAACTGAAGTGGCGTTGATAGCCAAACTTCAGCATCGTAATCTTGTGAAGCTTCTTGGTTTTTGCATTCAAGGAGTAGAAAAAATATTGGTCTATGAATACATGCCGAACAAAAGCCTGGACTACTTCATTTCTGATGAAATTAGAAGGAAGTTGCTAGATTGGCCTAAACGTTTCAACATTATTAGCGGCATTGCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGATTAAGAATTATTCATAGAGATCTAAAAACCAGCAACATTTTGCTGGATGCAAATTTGAATCCTAAAATATCAGACTTTGGCTTAGCACGAACATTCTTAGGCGATCAAGTGGAGGCTAACACAAACAGGATAGCTGGAACATAG 4260 0.3946 MMNNYSRMLLLIWFSLISCFKTTTSKDSLRMSEYIRDGETLVSAGGSFEVGFFSPGASTRRYLGLWYRDASRNNTILWVANRERPLHNKSGVLIFKETGDLQLLSDTNNTIWSSNISSKALSNSVAQLLDSGNLVVKNVPDTKEGSFLWQSFDYPCDTYIPGMKFGRDLATGLDRSLSCWKSTEDPAVGEYSLRVDPRGYPQVMQMKGSVIISRIGSWNGIYFTGTPVEGMSILKRNFVLNSKEVYFEFEILDRSIFSILKTNPSGDAQVMTWTSQTTSRVEVSLTGGQYACGSYALCGSNSVCSMAADVATCDCVKGYTPKFPEKWYISDWSSGCSRKDALDCDDVVGFLKYSDMKLPDTSSSWYSETMNLEECQKLCLKNCSCTAYANLDIRNGGSGCLLWFGNLTDMMQFSKGGQDLYIKVPASELGNSHGNTNKKKIGIAVGVSIFGLATSIAITTIIRNPARILNRHKQRQEDINLPKFDFSLLAKATENFSSNNKLGEGGFGPGKMIDGQEIAVKRLSKKSGQGSEEFKNEVMLIAKLQHRNLVKLLGYCIQGEEKILIYEYMPNKSLDYFVFGEVRRKLLDWPKRFNIISGIARGLLYLHRDSRLRVIHRDLKTSNILLDVDLNPKISDFGLARTFSCDQVEANTDRVAGTYGYMSPEYAVHGQFSLKSDVFSYGVIVLELVSGLKNREFSDPENNLNLLGHAWQLWTDERPLELLDEELKEGCIPTEVIRCIQVGLLCVQQRPENRPDMSSVILMLNVIWFFLVSCMRTTTSSDSLGMAQYIRDGESLVSAGGSSELGFFSPGTSTSRYLGVWYRDTSGNPTVVWVANRERPLHNKSGVLQFNKMGILQLLDETNNTVWSSNISSKSWSNSIAQILDSGNLVVTNGKNIYNSSFLWQSFDYPCDTLMPGMKIGWNFVTGQEKYVSSWKSEEDPAVGEYTIKIDPRGYPQIMVMKGSLISFRGGSWNGLYFTGSPSQNTQTFRSNFVLNGKEVYYEFEMLDTSIFTVLKEYPSGNGQYLVWTSQTRNKVQVTQVANQGGCERYAYCGSNAICIVDSNVAICKCLKGYIPNPKFPKSQNMSYWSNGCERKVALDCNNTNGFLRYTGIKLPDTSSSWYSETMNLQECQKFCLKNCSCSAYSSLDIRNGGSGCLIWFHNLTDIIQFTQGGQDLYLKVPSSELAANGHGNIKQKKVGIAVGVIIFGLITCVSIMIIHPGTRKIIYREKQMQEDIDLPAFNFSVLAKATEKFSSSNKLGEGGFGEVYKGTLTDGQELAIKRLSKKSGQGLEEFKTEVALIAKLQHRNLVKLLGFCIQGVEKILVYEYMPNKSLDYFISDEIRRKLLDWPKRFNIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLNPKISDFGLARTFLGDQVEANTNRIAGT* 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0190 1419 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 777 1419 - -
Amo09g0190 1419 SUPERFAMILY Protein kinase-like (PK-like) 477 765 IPR011009 -
Amo09g0190 1419 ProSiteProfiles Bulb-type lectin domain profile. 26 149 IPR001480 -
Amo09g0190 1419 SUPERFAMILY alpha-D-mannose-specific plant lectins 831 941 IPR036426 -
Amo09g0190 1419 Gene3D Phosphorylase Kinase; domain 1 1222 1329 - -
Amo09g0190 1419 SMART serkin_6 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0190 1419 ProSiteProfiles Protein kinase domain profile. 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0190 1419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Amo09g0190 1419 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 22 765 - -
Amo09g0190 1419 CDD STKc_IRAK 502 765 - -
Amo09g0190 1419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1375 1387 IPR008271 GO:0004672|GO:0006468
Amo09g0190 1419 Pfam PAN-like domain 347 410 IPR003609 -
Amo09g0190 1419 Pfam PAN-like domain 1101 1167 IPR003609 -
Amo09g0190 1419 Pfam Protein kinase domain 1255 1408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0190 1419 CDD PAN_AP_plant 342 425 - -
Amo09g0190 1419 Pfam D-mannose binding lectin 75 181 IPR001480 -
Amo09g0190 1419 Pfam D-mannose binding lectin 830 936 IPR001480 -
Amo09g0190 1419 ProSiteProfiles PAN/Apple domain profile. 344 426 IPR003609 -
Amo09g0190 1419 SMART blect_4 787 910 IPR001480 -
Amo09g0190 1419 SMART blect_4 32 155 IPR001480 -
Amo09g0190 1419 ProSiteProfiles PAN/Apple domain profile. 1101 1183 IPR003609 -
Amo09g0190 1419 Gene3D - 776 907 IPR036426 -
Amo09g0190 1419 Gene3D - 21 152 IPR036426 -
Amo09g0190 1419 SMART ntp_6 345 424 IPR003609 -
Amo09g0190 1419 SMART ntp_6 1102 1181 IPR003609 -
Amo09g0190 1419 SUPERFAMILY Protein kinase-like (PK-like) 1237 1418 IPR011009 -
Amo09g0190 1419 CDD B_lectin 32 155 IPR001480 -
Amo09g0190 1419 ProSiteProfiles Protein kinase domain profile. 1254 1419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0190 1419 CDD B_lectin 788 910 IPR001480 -
Amo09g0190 1419 Gene3D Transferase(Phosphotransferase) domain 1 569 769 - -
Amo09g0190 1419 Gene3D Transferase(Phosphotransferase) domain 1 1330 1419 - -
Amo09g0190 1419 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Amo09g0190 1419 ProSitePatterns Protein kinases ATP-binding region signature. 1260 1282 IPR017441 GO:0005524
Amo09g0190 1419 Gene3D Phosphorylase Kinase; domain 1 469 568 - -
Amo09g0190 1419 Pfam Protein tyrosine and serine/threonine kinase 500 761 IPR001245 GO:0004672|GO:0006468
Amo09g0190 1419 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 186 IPR036426 -
Amo09g0190 1419 ProSiteProfiles Bulb-type lectin domain profile. 781 904 IPR001480 -
Amo09g0190 1419 Gene3D Hepatocyte Growth Factor 1098 1178 - -
Amo09g0190 1419 Gene3D Hepatocyte Growth Factor 341 421 - -
Amo09g0190 1419 Pfam S-locus glycoprotein domain 968 1077 IPR000858 GO:0048544
Amo09g0190 1419 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Amo09g0190 1419 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 777 1419 - -
Amo09g0190 1419 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 765 - -
Amo09g0190 1419 CDD PAN_AP_plant 1097 1182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0190 Amo-Chr9 1997458 2005269 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0190 483 765 Receptor kinase-like Gene Family AT4G05200 59.091 5.27e-116 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo09g0190 PK_Tyr_Ser-Thr 1.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0190 - - aip:107614884 2768.42