LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo09g0176	ATGATTCGAAATGGTTGTGTTGCATCTCCACAAGTGTGTGTTCCTTTGAATTCGAGGCCATGGAAAGGTGTCATGCCTTGTAGCTCTTTCTTATGCTGTACTTCTCAGTTTCCTGCCAAGATTGCTGTTTCCAACATTCAGAGCTCTTCCTCTTTTGGACATAGTTTTGAGTGTAAATCCTCGTTGCAAAGAGGAATGACATTCTCGAACATGTCTGTTGCATCGAGCCTACTCTCAAGTAGGGGTCATAATCCTCTATTTCGCACAATCCCTGTGTTACCGAAACGATGCAGGTCTACTACAACCGTTCAAGCATCAAAGGACGTCCCAACTAGTTGGCGTTATCCACAAATGACCAAGAAACCAAGATGGTGGTGGAGAACATTAGCGTGCCTCCCTTACCTCATGCCTCTCCACGAGACATGGATGTACGCCGAGACAGCATACAATCTTAACCCCTTTTTGGAATACTTTGAGTTCCTGACATACCCTTTTCTGGAGGCTATTGGCATGCTGCCTAGCTGGTTTCTCATGGCATACTTCTTCGTCGCCTACCTTGGAATCGTGAGGAGAAAAGAATGGCCTCACTTCTTCAGATTCCATGTTGTGATGGGAATGCTGTTGGAGATTGCATTGCAGGTTATAGGAACTGTGAGTCGCTGGATGCCGCTATCGGTCTACTGGGGTAAACTTGGAATGCATTTCTGGACCGGCGTATCATTCGCTTATCTCTTCACCGTCTTGGAGTCCATAAGGTGTGCTCTCGCCGAGTTTGTTTTGTGA	783	0.4636	MIRNGCVASPQVCVPLNSRPWKGVMPCSSFLCCTSQFPAKIAVSNIQSSSSFGHSFECKSSLQRGMTFSNMSVASSLLSSRGHNPLFRTIPVLPKRCRSTTTVQASKDVPTSWRYPQMTKKPRWWWRTLACLPYLMPLHETWMYAETAYNLNPFLEYFEFLTYPFLEAIGMLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLSVYWGKLGMHFWTGVSFAYLFTVLESIRCALAEFVL*	261

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo09g0176	260	Pfam	Chloroplast import apparatus Tic20-like	96	256	IPR005691	-
	Amo09g0176	260	PANTHER	PROTEIN TIC 20-II, CHLOROPLASTIC	13	256	IPR005691	-
	Amo09g0176	260	PANTHER	HIT-TYPE ZINC FINGER FAMILY PROTEIN-RELATED	13	256	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo09g0176	Amo-Chr9	1869423	1871074	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo09g0176	61	256	Chloroplast and Mitochondria Gene Families	AT4G03320	37.688	2.00e-40	139

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo09g0176	-		-	adu:107464071	534.643