Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0130 ATGACTAAACAGAAACCATACATGGTCAGAGTTAATCTTCATCTTTCCTATGTACTATTGCTCATTTACTTCCTTTTTTGGGTCTTGATTAACACTACAAAAGCTGATGATATTGGTGTTTACTGGGGCCAAAATAGTGATGAGGGAACTCTTGCTAATACATGTGAATCAAGAAAGTACTCCTATGTAAACATAGCATTCCTTACCACATTTGGAAATGGTGAAACCCCGGTACTAAACCTGGAAGGACATTGTAATCCTTCTTCAAAAGGGTGCACTGGTCTTAGCTTAGATATCAAAAGTTGCCAGAAGCAAGGGATCAAGGTCATGCTCTCAATCGGAGGAGTATCCAGTACATCCCAATTGACTTCTTCTAAAGATGCTAAAAATGTTTCTGATTATCTCTGGAACAATTTCTTGGGTGGTAAGTCATCTTCGCGCCCTCTTGGGGATGCAGTGTTAGATGGGATAGAATTTAACCCAGGTGATAATGGATACTCAATATACTGGATGGACCTTGCGCGTTATCTCAAGTCCAACTCAACACAAAATGTGTCTATAGGTGCAGCTCCTCAATGCCCCCTTGTTAGTGCTGAGAACTCTACCTTTAGTAGTGGATATTTCGATTATCTTTCGGTACAATTCTACAACAATCCTCCATGCAATTTTGTGAGTAGCAGTACTAGTGGCTTCATAAATGCATGGCACCAATGGAGCAATTTGAAAGTGAAGAAAATATTTCTGGGGTTGCCAGCATCTTCTGATGAAGCTGCATCTGGCTATATTCCTGCAAATTTGTTAAATTCTCAGGTCCTTCCTATCATAAGGAACTCATCTAATTATGGAGGCATAATGTTGTGGGACAGATACAGCGATGTTAAGAGCAGATATAGTGATTCCATCAAATTCGATACAGGAGCGCAAGCATCCACGCCTGCCAAAAGGAACAAAACCCACACAGGGAAAGCACCCATTCCTGTGGAAAGCATCAAACCTCATGCAGGAAATGGAAAACGCCATCTAGTTATAAGGATAGTTATTGGCGTGGGAGCTGCCATTACAATATGTTTAATTTGCTACTTGAGCTGTGTATGTTGGAGGAAGTACAAAGCAGAAGTGGATACAAGAAACAGGCAAAGGAAGCTAATACATGACATTGGAGGTGCTGCAATGCTTTCCAGGATGAATTACATAGCAAAAAAGTTTAAAAGAGAGGCTAATGCAGGCGATGAGATTGAAATATTCAGTTTTGAAAGCATGGTCGCTGCTACAAACAATTTCTCAAGCTCAAATAAGCTTGGTGAAGGAGGATTTGGACCTGTTTATATGGGTAGATTGACAAACCAACAAGAAATTGCGATAAAGCGACTCTCTAAGAGTTCGGGGCAAGGGTTAACAGAGTTTAAGAATGAAGCAAAACTCATTGCAAAACTGCAGCACACTAATCTTGTGAAGCTTATAGGCCTCTGCATCCAAAGAGAAGAGAGAATGTTGGTCTATGAGTACATGTCCAACAGAAGCTTAGACTTGCACTTATTTGATGCTGAAAGAAGGAATGTTTTGGATTGGGAAAAGCGGCTTAACATCATAGAAGGCATTGCTCAAGGACTATTATATCTTCACAAGTATTCAAGGCTAAAAGTGATTCATCGTGATTTGAAAGCCGGCAACATCTTACTTGATGATGAGATGAAACCTAAGATATCGGATTTTGGCATGGCTAGAATACTAGGACTAACAGGTTCTGAAGAAAAAACAAACCGAATTGTTGGAACACATGGTTACATGTCTCCAGAGTATATGTTAAATGGCGTCGTCTCCCCAAAAGTAGACGTTTTCAGCTTTGGCGTATTGCTGCTAGAGATTCTCAGTGCAAAAAAGAATAACTCCTCTTACAACCCTGATTTTCCACTACTCAATCTAATTGGACATGCATGGAAGTTATGGAATGAAGGTAAAGCTTTAGAGCTAATGGACCATGGATTAAATGAAACATGCAACACTAAAGAAGTATTGAGATGTATCCACATTGGCCTATTGTGTGTGCAAAACGTTCCAACAGATAGACCCACCATGGTTGATGTTGTCTCTTTTTTGTCAAATGATGCTATTCAACTTGCTCAGCCAAAGCAGCCAGCATTCTTCATCAATGTTGATACAAACCAACAACAATTGCATACTAACACAAAAGAAATTTTCTCCAAAAATAGTTTAACATTATCTGATGTGGATGGCAGATGA 2241 0.3971 MTKQKPYMVRVNLHLSYVLLLIYFLFWVLINTTKADDIGVYWGQNSDEGTLANTCESRKYSYVNIAFLTTFGNGETPVLNLEGHCNPSSKGCTGLSLDIKSCQKQGIKVMLSIGGVSSTSQLTSSKDAKNVSDYLWNNFLGGKSSSRPLGDAVLDGIEFNPGDNGYSIYWMDLARYLKSNSTQNVSIGAAPQCPLVSAENSTFSSGYFDYLSVQFYNNPPCNFVSSSTSGFINAWHQWSNLKVKKIFLGLPASSDEAASGYIPANLLNSQVLPIIRNSSNYGGIMLWDRYSDVKSRYSDSIKFDTGAQASTPAKRNKTHTGKAPIPVESIKPHAGNGKRHLVIRIVIGVGAAITICLICYLSCVCWRKYKAEVDTRNRQRKLIHDIGGAAMLSRMNYIAKKFKREANAGDEIEIFSFESMVAATNNFSSSNKLGEGGFGPVYMGRLTNQQEIAIKRLSKSSGQGLTEFKNEAKLIAKLQHTNLVKLIGLCIQREERMLVYEYMSNRSLDLHLFDAERRNVLDWEKRLNIIEGIAQGLLYLHKYSRLKVIHRDLKAGNILLDDEMKPKISDFGMARILGLTGSEEKTNRIVGTHGYMSPEYMLNGVVSPKVDVFSFGVLLLEILSAKKNNSSYNPDFPLLNLIGHAWKLWNEGKALELMDHGLNETCNTKEVLRCIHIGLLCVQNVPTDRPTMVDVVSFLSNDAIQLAQPKQPAFFINVDTNQQQLHTNTKEIFSKNSLTLSDVDGR* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0130 746 Pfam Glycosyl hydrolases family 18 38 292 IPR001223 GO:0005975
Amo09g0130 746 SUPERFAMILY Protein kinase-like (PK-like) 410 731 IPR011009 -
Amo09g0130 746 ProSiteProfiles Protein kinase domain profile. 427 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0130 746 CDD STKc_IRAK 433 699 - -
Amo09g0130 746 Gene3D Glycosidases 37 305 - -
Amo09g0130 746 MobiDBLite consensus disorder prediction 308 327 - -
Amo09g0130 746 Pfam Protein tyrosine and serine/threonine kinase 430 699 IPR001245 GO:0004672|GO:0006468
Amo09g0130 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 548 560 IPR008271 GO:0004672|GO:0006468
Amo09g0130 746 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 311 715 - -
Amo09g0130 746 CDD GH18_hevamine_XipI_class_III 37 302 IPR045321 -
Amo09g0130 746 SUPERFAMILY (Trans)glycosidases 34 302 IPR017853 -
Amo09g0130 746 Gene3D Transferase(Phosphotransferase) domain 1 503 715 - -
Amo09g0130 746 SMART serkin_6 427 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0130 746 PANTHER OS01G0783800 PROTEIN 311 715 - -
Amo09g0130 746 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 36 308 IPR001223 GO:0005975
Amo09g0130 746 Gene3D Phosphorylase Kinase; domain 1 400 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0130 Amo-Chr9 1263881 1268175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0130 405 717 Receptor kinase-like Gene Family AT4G11530 54.717 1.92e-116 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo09g0130 PK_Tyr_Ser-Thr 6.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0130 - - adu:107464076 1462.59