Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0118 ATGCCCAAGAAGATTAAAAAATCTCTCAAACATTACATATCCAAGATCAAGAACACTTCTCACCCACAAATTCATTTAGTACCCTCCAAGAAATGGGTTCTCTCAAGTTGCAAGCATCCAAGGACACCTTCTTTTGCCTTGGAAAACAAGAAAAAAGACACCAACAAAGATGAAGAAGCGACCCTAGCAGATGTGGATCGCTTCCTCTTCGAAAATTTCAAGTCACTTTACTTGAAAGACGACGATGAAGAAGCTACCACTGCCACAACCGCCACAAAAAATAAGGAGCATAATAAATCTAAAAAGGTGGCGGAAGAAAAAAGCTATGATGATGAACACAAAGGTATAAAAGTAGGATCTTCTCCTATTTTTTATGATGACATAATTGATCTAGGTGGATCTAATAGATTCTTTATGCCACGTGCACTCTCAGAGTCATATTCGTTTAGGAATACGACTCTGAGAGGTGATGACGATGAAATTATATCAAATTCAACTTCAGTATCAACACATAATAATTCGTCACCATCTTCACAATTATATCATAGTGCAAAAACTTATGTCCAAGGCCATAATCATCACGATCGTGATTATAGTGAACGTGATCATAGGCTTGTGGATAACTGTGTGGCCGTGTTGGCATCTTCGGAGAGCCCTTATGAGGATTTCAAGAATTCCATGCAAGGAATGGTGGATGCAAGGGTAAGGAACAACCAAAGGGTGGATTGGGATTTCATGGAAGAGCTCTTGTTTTGTCATATAAATTTGAATGACAAGAAGTTACACAAGTTCATACTAAGTGCTTTTGTGGAGTTGGTCACTGCCTTGCGCCAGCAGCCGGAGAATAATCCTCCGGCAACGGCTGGGAAGCCACGGAGCGTTCGAACGGTGAGAAGTGGAAATTTGGAAGGGAGGTAA 918 0.4063 MPKKIKKSLKHYISKIKNTSHPQIHLVPSKKWVLSSCKHPRTPSFALENKKKDTNKDEEATLADVDRFLFENFKSLYLKDDDEEATTATTATKNKEHNKSKKVAEEKSYDDEHKGIKVGSSPIFYDDIIDLGGSNRFFMPRALSESYSFRNTTLRGDDDEIISNSTSVSTHNNSSPSSQLYHSAKTYVQGHNHHDRDYSERDHRLVDNCVAVLASSESPYEDFKNSMQGMVDARVRNNQRVDWDFMEELLFCHINLNDKKLHKFILSAFVELVTALRQQPENNPPATAGKPRSVRTVRSGNLEGR* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0118 305 Pfam Transcriptional repressor, ovate 216 276 IPR006458 -
Amo09g0118 305 MobiDBLite consensus disorder prediction 280 305 - -
Amo09g0118 305 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 290 - -
Amo09g0118 305 MobiDBLite consensus disorder prediction 86 113 - -
Amo09g0118 305 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 290 IPR038933 GO:0045892
Amo09g0118 305 ProSiteProfiles OVATE domain profile. 212 275 IPR006458 -
Amo09g0118 305 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 210 277 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0118 Amo-Chr9 1121370 1122287 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Amo09g0118 Ovate 1.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0118 - - ahf:112709854 556.214