Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0109 ATGAAACCTAAGATATCGGATTTTGGCATGGCTAGAATACTAGGACTAACAGGTTCTGAAGAAAAAACAAACCGAATTGTTGGAACACATGGTTACATGTCTCCAGAGTATATGTTAAATGGCGTCGTCTCCCCAAAAGTAGACGTTTTCAGCTTTGGCGTATTGCTGCTAGAGATTCTCAGTGCAAAAAAGAATAACTCCTCTTACAACCCTGATTTTCCACTACTCAATCTAATTGGACATGCATGGAAGTTATGGAATGAAGGTAAAGCTTTAGAGCTAATGGACCATGGATTAAATGAAACATGCAACACTAAAGAAGTATTGAGATGTATCCACATTGGCCTATTGTGTGTGCAAAACGTTCCAACAGATAGACCCACCATGGTTGATGTTGTCTCTTTTTTGTCAAATGATGCTATTCAACTTGCTCAGCCAAAGCAGCCAGCATTCTTCATCAATGTTGATACAAACCAACAACAATTGCATACTAACACAAAAGAAATTTTCTCCAAAAATAGTTTAACATTATCTGATGTGGATGGCAGATGA 552 0.3786 MKPKISDFGMARILGLTGSEEKTNRIVGTHGYMSPEYMLNGVVSPKVDVFSFGVLLLEILSAKKNNSSYNPDFPLLNLIGHAWKLWNEGKALELMDHGLNETCNTKEVLRCIHIGLLCVQNVPTDRPTMVDVVSFLSNDAIQLAQPKQPAFFINVDTNQQQLHTNTKEIFSKNSLTLSDVDGR* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0109 183 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 154 - -
Amo09g0109 183 ProSiteProfiles Protein kinase domain profile. 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0109 183 PANTHER OS01G0783800 PROTEIN 1 154 - -
Amo09g0109 183 Pfam Protein tyrosine and serine/threonine kinase 4 136 IPR001245 GO:0004672|GO:0006468
Amo09g0109 183 Gene3D Transferase(Phosphotransferase) domain 1 1 159 - -
Amo09g0109 183 SUPERFAMILY Protein kinase-like (PK-like) 2 170 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0109 Amo-Chr9 1083296 1084019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0109 1 183 Receptor kinase-like Gene Family AT4G23150 47.340 6.37e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo09g0109 PK_Tyr_Ser-Thr 5.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0109 - - adu:107464041 373.244