Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0088 ATGGCTGAGGCTTTGCTTGGAATTGTGCTGAAGAACTTGTTCCCTTTGGTCCAGAGTGAATTTGCAGCCTTTTTTGGAATCAAGGAAAAGGCTGAAGAGCTATCAAAAAATTTAGAACTCATCAAAGCTGTTCTTGATGATGCCGAGGAGAAACAATGGTCAAATCGTCCTTTGAAGGTGTGGCTACAGCAGCTTAAAGATGCAATGTACGAGATGGATGACATCCTTGATCAGTTGCCTACTGAATCCTCTCAACTTGGGTGCTTAACTTCTTTGAACCCAAAGAAGGTGATGCATCGTCGTGAGCTTGGACAGAAGTTGAATGAGATAATAAGGAGGTTGAATGGAATTGCTCAAGCTGGGAGCAACTTTGGTCTTAGACAAGTTGTGAGGGAAAGGCAAAGTGAAGTAGTTGAATGGCGCCAAACAAGCTCAACTATTGCCGTTCCTCAAGTGTACGGACGAGATGAAGATAAAGCGAGAGTTGTGGAGTTTCTTCTTAGCCCATCACGAAGCTTTGAGTTCCTTTCCGTCTATCCCATTGTTGGATTAGGTGGTCTTGGAAAAACAACGCTTGTTCAGCTGGTCTACAACGATCACCAAGTAGAAGCTATCACAAATGCTAAGTTTGAGCGCATGGCTTTAGATGTAACGGAGAAAAAAGTGAAAGAATTGCTGCAAAGTAAAAAGTATTTGTTGGTTTTAGATGATGTATGGAAAAGACACCAAGAAATGGAATCAGGATTAACCCAAGACAAATGGGATAAGTTAAGATCCGTGTTGTCTTGTGGATCTAAAGGCTCCTCCATTTTAGTATCCACTCGTGATAATCATGTTGCAACAATTATGGGAACATGCCAAGCTCATCATTTGGACCGTCTATCCGATGATGATTGCTGGTCCTTGTTTAAACTCCGTGCATTTGGAGCTGACAAAGAAGAGCGTGCAGAGCTTGTAGCAATAGGGAAGGAAATAGTCAAGAAATGTGGAGGATCACCTCTTGCAGCACTGGCATTAGGAGGTTTGATGCAATCCAGAAGCACGGAAAAGGAATGGCTTGAAGTTCAGAAAAGTAAGCTTTGGAGTTTACCGGATGAGAATGATATTATGGCTGTCTTGAGATTAAGCTACTCTTGTTTATCGCCAACTCTAAAGCAGTGTTTTGCTTTCTGTGTCATATTTCCCAAAGATGCAGAAATCATGAAGCAGGAATTGATTTATCTTTGGATGGCTAATGGATTTATTTCATCACGGCCAGACTTGGAGGTGGAAGAGGTTGGCAACATGGTTTGGAATGAATTATACCAAAAATCATTGTTCCAAGATGTTAGGAGTGATGACTTTTCTGGCGAGATTTATTTCAAGATGCATGATTTAGTCCACGATCTTGCTCAATCAATCTCAGGGCAAGAGTGTATATGCTTGGAGAGACAAAACCTTAATGATTCTTCAAGAAACCCCCATCATATTGTTTTTCACGGCATTGATAAAGAACAATTCAATAAGAGAGCCTTTGAAAAAGCTAAATCCTTGCGGACATTGTATCAACTGAATTCGGATGAATTTCCCTTCAGCTCTAGATTGATTCCAACAAATAATTCGCTTCGAGTTTTGTGCATATATAGTAGAAAGATACCATCATTTGGGAGTTTAAGTTGCTTGAGGTATTTGGAGCTTCATGATTTGGATATAAAGAGGTTGCCAGCTAGTATTTGCAATTTGCGAAGACTGGAAATCTTGAAACTAAAAAAATTGTCGAGTCTTTGCCGTCTACCGAAACACTTGACAAGGATGCAAAATCTCCGACATCTTGTCATTGATGATTGTGATGGGCTATCTGAAATGTGTCCAGACATTCACAAACTATGTGAATTGAGAACACTAAGTGTATACGTTGTGAAATCAGAGAAAGGGCATAGTTTGGCAGAGCTACGTGGTTTGAATCTGGGAGGAAAGCTAAGCATCTCAGGCCTAGGAAATGTTGGGAGTATATCTGAAGATGAAAATGCCAACTTGAAGGGTAAACAAGACCTTCGAGAATTGATTTTGTCATGGAGCAATAGTGGTAAGAGGAAGTCGGTAGTGGGAGCAGAAGAAGTACTTGAAGCGCTTCAACCTCACTCCACACTCAAGCTGTTGACGATACAATTCTATAAGGGATTACATTGGCCAACTTGGATGGGAAACATTTCTGCTACCCACAATTTAGTTTCTCTTCAACTTGAGAATTGTGGAAAGTGCGGGCATGTTCCTCCAGTGGGAAAACTTCCATTTCTGAAGAAGCTTGTGGTAAGTAGCATGAATGATGTGCAGTACATTGAGGAAGATGAAAGTTATGATGGTGTTGAAACAATGCCATTCCCATCTTTGGAGGAATTGCGAGTGGAGAGATTGCCAAAGGTGGAGAGGTTGTTGAAACGGGAAATAACACATATGTTCCCCTCTCTTTCTACCATAGAAATCACCGATTGCCCTAAACTGCAATTGCCGTGCCTTCCAAGTGTTAAGGACCTCACTGTTTGGTATTGTAGCAATGAGCAACTGAAGTCAATCTCTAATCTCAATGCTCTTAACCAACTTCGTCTTTGGGGAAATCATGAAGTGTCGTGCTTCCCAGAAGGAATGATGAGCAACATGACCTCTCTTGTATCTCTGGATATATGTCTTTTCACAAAATTGAAGGAACTGCCATCTGACATCACAAAACTCACTGCTTTGTCTGATCTAACCATCGAAGAATGTGGTAAGCTGGAGTGTTTACCAGAACAGGGTTGGGAAGGCTTATCTTCACTTCGAGAACTGTCAATTCATAACTGTTACAGTTTGGGATCCTTGCCTGATGGTGTCCGGCACTTAACTTCACTTGAATATTTGAGTATTAGTGGCTGCCCAGTGTTGAAAGAGCTGTGTAAGGAAGGAACAGGGGAGGATTGGCACAAGATAGCACATGTTCCTCGTGTATATAACTGGTAA 2973 0.4134 MAEALLGIVLKNLFPLVQSEFAAFFGIKEKAEELSKNLELIKAVLDDAEEKQWSNRPLKVWLQQLKDAMYEMDDILDQLPTESSQLGCLTSLNPKKVMHRRELGQKLNEIIRRLNGIAQAGSNFGLRQVVRERQSEVVEWRQTSSTIAVPQVYGRDEDKARVVEFLLSPSRSFEFLSVYPIVGLGGLGKTTLVQLVYNDHQVEAITNAKFERMALDVTEKKVKELLQSKKYLLVLDDVWKRHQEMESGLTQDKWDKLRSVLSCGSKGSSILVSTRDNHVATIMGTCQAHHLDRLSDDDCWSLFKLRAFGADKEERAELVAIGKEIVKKCGGSPLAALALGGLMQSRSTEKEWLEVQKSKLWSLPDENDIMAVLRLSYSCLSPTLKQCFAFCVIFPKDAEIMKQELIYLWMANGFISSRPDLEVEEVGNMVWNELYQKSLFQDVRSDDFSGEIYFKMHDLVHDLAQSISGQECICLERQNLNDSSRNPHHIVFHGIDKEQFNKRAFEKAKSLRTLYQLNSDEFPFSSRLIPTNNSLRVLCIYSRKIPSFGSLSCLRYLELHDLDIKRLPASICNLRRLEILKLKKLSSLCRLPKHLTRMQNLRHLVIDDCDGLSEMCPDIHKLCELRTLSVYVVKSEKGHSLAELRGLNLGGKLSISGLGNVGSISEDENANLKGKQDLRELILSWSNSGKRKSVVGAEEVLEALQPHSTLKLLTIQFYKGLHWPTWMGNISATHNLVSLQLENCGKCGHVPPVGKLPFLKKLVVSSMNDVQYIEEDESYDGVETMPFPSLEELRVERLPKVERLLKREITHMFPSLSTIEITDCPKLQLPCLPSVKDLTVWYCSNEQLKSISNLNALNQLRLWGNHEVSCFPEGMMSNMTSLVSLDICLFTKLKELPSDITKLTALSDLTIEECGKLECLPEQGWEGLSSLRELSIHNCYSLGSLPDGVRHLTSLEYLSISGCPVLKELCKEGTGEDWHKIAHVPRVYNW* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0088 990 Gene3D Ribonuclease Inhibitor 834 974 IPR032675 -
Amo09g0088 990 Gene3D Ribonuclease Inhibitor 637 833 IPR032675 -
Amo09g0088 990 SUPERFAMILY L domain-like 455 826 - -
Amo09g0088 990 PANTHER DISEASE RESISTANCE PROTEIN RP 29 921 IPR044974 GO:0006952
Amo09g0088 990 Gene3D Ribonuclease Inhibitor 475 636 IPR032675 -
Amo09g0088 990 Gene3D - 208 288 IPR027417 -
Amo09g0088 990 SUPERFAMILY L domain-like 788 968 - -
Amo09g0088 990 Pfam Rx N-terminal domain 6 86 IPR041118 -
Amo09g0088 990 Gene3D - 6 118 - -
Amo09g0088 990 PRINTS Disease resistance protein signature 329 343 - -
Amo09g0088 990 PRINTS Disease resistance protein signature 950 966 - -
Amo09g0088 990 PRINTS Disease resistance protein signature 178 193 - -
Amo09g0088 990 Gene3D - 141 207 IPR027417 -
Amo09g0088 990 PANTHER OS05G0414200 PROTEIN 29 921 - -
Amo09g0088 990 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 391 IPR027417 -
Amo09g0088 990 Coils Coil 31 51 - -
Amo09g0088 990 Gene3D - 377 467 IPR036388 -
Amo09g0088 990 CDD RX-CC_like 2 118 IPR038005 -
Amo09g0088 990 Pfam NB-ARC domain 218 377 IPR002182 GO:0043531
Amo09g0088 990 Gene3D - 293 376 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0088 Amo-Chr9 924277 927327 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0088 181 774 WRKY Transcription Factor Family AT5G45050 23.890 1.28e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0088 - - ahf:112709874 1521.91